Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03441

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
3,847,225	-				+0.7
3,847,240	+				+0.4
3,847,305	+				-0.4
3,847,331	+				-1.2
3,847,346	+				+0.3
3,847,346	+				-0.4
3,847,346	+				+0.1
3,847,354	-				+0.1
3,847,354	-				-0.4
3,847,354	-				+0.2
3,847,356	+				-0.2
3,847,364	-				-1.5
3,847,375	+				+0.0
3,847,754	+		MIT1002_03440	0.69	-0.5
3,847,754	+		MIT1002_03440	0.69	-0.5
3,847,754	+		MIT1002_03440	0.69	+0.2
3,847,762	-		MIT1002_03440	0.71	+0.5
3,847,948	+				+0.3
3,847,954	-				-1.2
3,847,954	-				+0.3
3,847,954	-				-2.0
3,847,964	-				-1.2
3,848,092	+				-1.2
3,848,170	+				+1.2
3,848,170	+				+0.1
3,848,184	+				-1.9
3,848,222	+				-1.1
3,848,222	+				+0.4
3,848,230	-				+0.4
3,848,237	-				+0.2
3,848,315	-		MIT1002_03441	0.18	-0.8
3,848,383	-		MIT1002_03441	0.32	-0.4
3,848,548	+		MIT1002_03441	0.66	-0.9
3,848,556	-		MIT1002_03441	0.68	-0.4
3,848,558	-		MIT1002_03441	0.68	-0.3
3,848,886	+		MIT1002_03442	0.19	+0.1
3,848,886	+		MIT1002_03442	0.19	-0.4
3,848,972	+		MIT1002_03442	0.30	-0.8
3,848,973	+		MIT1002_03442	0.30	-0.8
3,849,028	+		MIT1002_03442	0.37	-0.3
3,849,033	+		MIT1002_03442	0.37	+0.6
3,849,038	-		MIT1002_03442	0.38	+0.2
3,849,040	-		MIT1002_03442	0.38	-0.2
3,849,087	+		MIT1002_03442	0.44	-0.1
3,849,104	+		MIT1002_03442	0.46	+0.5
3,849,213	+		MIT1002_03442	0.59	-0.2
3,849,213	+		MIT1002_03442	0.59	-0.6
3,849,221	-		MIT1002_03442	0.60	-0.1
3,849,221	-		MIT1002_03442	0.60	+0.6
3,849,285	+		MIT1002_03442	0.68	+0.5
3,849,305	+		MIT1002_03442	0.71	-0.4
3,849,367	-		MIT1002_03442	0.78	+0.7
3,849,369	+		MIT1002_03442	0.78	+0.6
3,849,369	+		MIT1002_03442	0.78	+0.4
3,849,377	-		MIT1002_03442	0.79	-1.0
3,849,377	-		MIT1002_03442	0.79	+0.9
3,849,481	+				-0.4
3,849,483	+				-0.1
3,849,483	+				-1.7
3,849,483	+				+0.4
3,849,483	+				-0.5
3,849,483	+				+0.9
3,849,484	-				+0.7
3,849,489	-				-0.1
3,849,491	-				-0.4
3,849,491	-				-1.7
3,849,503	+				-0.8
3,849,550	+				-2.2
3,849,560	+				-0.6
3,849,560	+				+0.3
3,849,568	-				-0.8
3,849,608	-				+0.1
3,849,643	+				-0.8
3,849,663	-				+1.4
3,849,664	-				-0.1
3,849,707	+				-1.0