Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03294

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
3,674,075	+		MIT1002_03293	0.71	+0.5
3,674,145	-		MIT1002_03293	0.73	-0.6
3,674,156	-		MIT1002_03293	0.74	+0.5
3,674,180	+		MIT1002_03293	0.74	+1.7
3,674,188	-		MIT1002_03293	0.75	-0.4
3,674,249	-		MIT1002_03293	0.77	+0.5
3,674,391	-		MIT1002_03293	0.82	-0.4
3,674,417	-		MIT1002_03293	0.83	+0.1
3,674,525	+		MIT1002_03293	0.86	+0.1
3,674,546	+		MIT1002_03293	0.87	-0.5
3,674,645	+				+0.6
3,674,647	+				-0.3
3,675,211	+		MIT1002_03294	0.76	-1.1
3,675,229	-		MIT1002_03294	0.85	-2.3
3,675,229	-		MIT1002_03294	0.85	-1.7
3,675,229	-		MIT1002_03294	0.85	-0.1
3,675,229	-		MIT1002_03294	0.85	-1.2
3,675,248	-				-0.4
3,675,250	+				-0.2
3,675,327	+				-0.2
3,675,375	+				+1.5
3,675,505	-				-0.7
3,675,505	-				+0.7
3,675,572	+				+0.2
3,675,611	-				+0.1
3,675,778	+		MIT1002_03295	0.37	+0.9
3,675,788	+		MIT1002_03295	0.39	+1.3
3,675,790	+		MIT1002_03295	0.40	-0.5
3,675,858	-		MIT1002_03295	0.60	-0.7
3,675,858	-		MIT1002_03295	0.60	+0.2
3,675,858	-		MIT1002_03295	0.60	-0.5
3,675,885	-		MIT1002_03295	0.68	+0.9
3,675,895	+		MIT1002_03295	0.70	+1.9
3,675,937	+		MIT1002_03295	0.83	-0.5
3,675,965	+				-1.0
3,676,005	-				-1.3
3,676,005	-				+1.0
3,676,201	-		MIT1002_03296	0.15	-1.1
3,676,201	-		MIT1002_03296	0.15	+0.8
3,676,201	-		MIT1002_03296	0.15	+0.9
3,676,201	-		MIT1002_03296	0.15	-0.5
3,676,201	-		MIT1002_03296	0.15	+0.9
3,676,240	-		MIT1002_03296	0.22	+0.2