Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03268

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
3,639,393	+		MIT1002_03267	0.79	+2.9
3,639,447	-		MIT1002_03267	0.82	+0.8
3,639,490	-		MIT1002_03267	0.84	+2.7
3,639,490	-		MIT1002_03267	0.84	-0.7
3,639,693	+				-1.2
3,639,711	-				-0.7
3,639,757	+				+0.9
3,639,779	-				-0.4
3,639,851	+				+0.2
3,639,859	-				+0.8
3,639,861	+				-1.8
3,639,888	+				-1.3
3,639,893	+				+0.8
3,639,893	+				+0.3
3,639,896	-				+0.6
3,639,901	-				-0.2
3,639,901	-				+2.1
3,639,924	+				+0.3
3,639,924	+				+1.0
3,639,932	-				-0.2
3,639,966	+				+0.7
3,640,059	+				-0.4
3,640,059	+				-0.2
3,640,127	+				-0.4
3,640,127	+				+0.5
3,640,155	-				-0.3
3,640,224	+				-1.5
3,640,253	+				-1.6
3,640,261	-				+0.1
3,640,261	-				-0.3
3,640,311	+				+2.8
3,640,320	+				-1.4
3,640,328	-				-0.3
3,640,352	-				+0.4
3,640,408	+		MIT1002_03268	0.15	+0.3
3,640,412	+		MIT1002_03268	0.16	+1.0
3,640,412	+		MIT1002_03268	0.16	-0.5
3,640,412	+		MIT1002_03268	0.16	-0.6
3,640,412	+		MIT1002_03268	0.16	+0.8
3,640,420	-		MIT1002_03268	0.17	+0.0
3,640,427	+		MIT1002_03268	0.19	+0.8
3,640,430	-		MIT1002_03268	0.19	-0.6
3,640,430	-		MIT1002_03268	0.19	-0.7
3,640,435	-		MIT1002_03268	0.20	+0.2
3,640,462	+		MIT1002_03268	0.25	+1.0
3,640,523	+		MIT1002_03268	0.36	+0.8
3,640,548	-		MIT1002_03268	0.40	+2.3
3,640,561	-		MIT1002_03268	0.43	+1.0
3,640,563	-		MIT1002_03268	0.43	+0.2
3,640,563	-		MIT1002_03268	0.43	+0.9
3,640,609	+		MIT1002_03268	0.51	+0.5
3,640,618	-		MIT1002_03268	0.53	-0.2
3,640,620	+		MIT1002_03268	0.53	+1.0
3,640,620	+		MIT1002_03268	0.53	+0.4
3,640,628	-		MIT1002_03268	0.55	+0.6
3,640,628	-		MIT1002_03268	0.55	-0.1
3,640,646	-		MIT1002_03268	0.58	-0.1
3,640,779	+		MIT1002_03268	0.82	-0.4
3,640,797	+		MIT1002_03268	0.85	+0.4
3,640,900	+				+0.6
3,640,900	+				+2.3
3,640,900	+				-0.1
3,640,900	+				-0.3
3,640,900	+				+1.7
3,640,900	+				+0.4
3,640,908	-				-0.2
3,640,908	-				+0.3
3,640,908	-				+0.5
3,640,968	+				+0.7
3,640,976	-				-0.2
3,640,976	-				+2.2
3,640,978	+				-0.3
3,641,079	+				-1.9
3,641,140	+				-0.8
3,641,163	+				+0.5
3,641,165	+				-0.6
3,641,250	+				+0.3
3,641,250	+				-0.5
3,641,252	-				+0.2
3,641,258	-				+0.4
3,641,325	+				-1.2
3,641,423	-				-1.1
3,641,457	+				+0.4
3,641,457	+				-0.1
3,641,457	+				-1.3
3,641,457	+				-0.1
3,641,462	+				-0.3
3,641,615	-		MIT1002_03269	0.37	-0.8
3,641,674	+		MIT1002_03269	0.47	+0.3