Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02803

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
3,106,572	+				+0.2
3,106,572	+				+0.5
3,106,770	-		MIT1002_02802	0.37	-1.0
3,106,873	-		MIT1002_02802	0.58	-0.9
3,106,897	-		MIT1002_02802	0.63	-0.9
3,107,005	-		MIT1002_02802	0.85	-0.2
3,107,098	-				-1.2
3,107,143	-				-1.3
3,107,248	-				+0.1
3,107,264	+				+0.6
3,107,269	+				-1.0
3,107,272	-				+0.1
3,107,364	+				+0.3
3,107,364	+				-0.0
3,107,451	+		MIT1002_02803	0.13	-2.5
3,107,459	-		MIT1002_02803	0.14	+1.3
3,107,469	-		MIT1002_02803	0.15	+0.5
3,107,502	-		MIT1002_02803	0.19	-1.7
3,107,524	-		MIT1002_02803	0.21	-1.1
3,107,716	-		MIT1002_02803	0.42	-0.8
3,107,782	+		MIT1002_02803	0.49	+0.7
3,107,785	-		MIT1002_02803	0.50	-1.8
3,107,785	-		MIT1002_02803	0.50	-1.5
3,107,841	+		MIT1002_02803	0.56	+0.6
3,107,878	-		MIT1002_02803	0.60	-0.6
3,107,922	+		MIT1002_02803	0.65	-1.8
3,107,930	-		MIT1002_02803	0.65	-0.1
3,107,939	+		MIT1002_02803	0.66	+0.1
3,107,940	-		MIT1002_02803	0.67	-0.3
3,107,959	-		MIT1002_02803	0.69	-0.3
3,107,970	-		MIT1002_02803	0.70	-0.3
3,108,006	-		MIT1002_02803	0.74	-0.1
3,108,016	+		MIT1002_02803	0.75	-0.1
3,108,036	-		MIT1002_02803	0.77	+0.7
3,108,067	+		MIT1002_02803	0.80	+0.0
3,108,094	+		MIT1002_02803	0.83	-0.5
3,108,136	-		MIT1002_02803	0.88	-1.8
3,108,145	+		MIT1002_02803	0.89	-0.0
3,108,183	+				-0.4
3,108,183	-				+0.1
3,108,232	+				+0.7
3,108,242	+				-1.6
3,108,348	+				-1.0
3,108,368	+				-1.1
3,108,376	-				-0.6
3,108,407	+				-0.5
3,108,407	+				+0.1
3,108,415	-				+0.3
3,108,415	-				+0.8
3,108,475	+		MIT1002_02804	0.12	-1.3
3,108,481	+		MIT1002_02804	0.13	+0.9
3,108,481	+		MIT1002_02804	0.13	-0.2
3,108,481	+		MIT1002_02804	0.13	+0.5
3,108,481	+		MIT1002_02804	0.13	+0.5
3,108,481	+		MIT1002_02804	0.13	-0.7
3,108,481	+		MIT1002_02804	0.13	+0.2
3,108,481	+		MIT1002_02804	0.13	+0.3
3,108,481	+		MIT1002_02804	0.13	+0.1
3,108,481	+		MIT1002_02804	0.13	-0.3
3,108,481	+		MIT1002_02804	0.13	+0.4
3,108,481	+		MIT1002_02804	0.13	-1.0
3,108,481	+		MIT1002_02804	0.13	+0.3
3,108,481	+		MIT1002_02804	0.13	+0.5
3,108,481	+		MIT1002_02804	0.13	-2.0
3,108,481	+		MIT1002_02804	0.13	+0.2
3,108,481	+		MIT1002_02804	0.13	-0.1
3,108,481	+		MIT1002_02804	0.13	+0.9
3,108,481	+		MIT1002_02804	0.13	+0.8
3,108,481	+		MIT1002_02804	0.13	+0.1
3,108,486	+		MIT1002_02804	0.13	-0.4
3,108,489	-		MIT1002_02804	0.13	-3.1
3,108,489	-		MIT1002_02804	0.13	+0.8
3,108,489	-		MIT1002_02804	0.13	+2.3
3,108,489	-		MIT1002_02804	0.13	-0.5
3,108,489	-		MIT1002_02804	0.13	+0.0
3,108,489	-		MIT1002_02804	0.13	-0.1
3,108,489	-		MIT1002_02804	0.13	+2.1
3,108,489	-		MIT1002_02804	0.13	-0.6
3,108,489	-		MIT1002_02804	0.13	+0.2
3,108,489	-		MIT1002_02804	0.13	-0.3
3,108,489	-		MIT1002_02804	0.13	-0.3
3,108,489	-		MIT1002_02804	0.13	-0.0
3,108,489	-		MIT1002_02804	0.13	+1.8
3,108,489	-		MIT1002_02804	0.13	-0.5
3,108,489	-		MIT1002_02804	0.13	+0.6
3,108,489	-		MIT1002_02804	0.13	+1.2
3,108,489	-		MIT1002_02804	0.13	-1.2
3,108,489	-		MIT1002_02804	0.13	+1.1
3,108,491	+		MIT1002_02804	0.14	+1.0
3,108,491	+		MIT1002_02804	0.14	-0.4
3,108,491	+		MIT1002_02804	0.14	-0.9
3,108,491	+		MIT1002_02804	0.14	-0.7
3,108,491	+		MIT1002_02804	0.14	+0.3
3,108,491	+		MIT1002_02804	0.14	+0.1
3,108,491	+		MIT1002_02804	0.14	-1.4
3,108,491	+		MIT1002_02804	0.14	-1.1
3,108,491	+		MIT1002_02804	0.14	-1.0
3,108,491	+		MIT1002_02804	0.14	+0.1
3,108,491	+		MIT1002_02804	0.14	-0.5
3,108,491	+		MIT1002_02804	0.14	-1.4
3,108,491	+		MIT1002_02804	0.14	-0.2
3,108,499	-		MIT1002_02804	0.14	-0.4
3,108,499	-		MIT1002_02804	0.14	+0.5
3,108,499	-		MIT1002_02804	0.14	+0.6
3,108,499	-		MIT1002_02804	0.14	-1.7
3,108,499	-		MIT1002_02804	0.14	-0.7
3,108,499	-		MIT1002_02804	0.14	+0.0
3,108,499	-		MIT1002_02804	0.14	+0.3
3,108,499	-		MIT1002_02804	0.14	+0.2
3,108,499	-		MIT1002_02804	0.14	+2.0
3,108,577	+		MIT1002_02804	0.19	-0.3
3,108,582	-		MIT1002_02804	0.20	-0.0
3,108,585	-		MIT1002_02804	0.20	-0.8
3,108,617	+		MIT1002_02804	0.22	+0.2
3,108,690	-		MIT1002_02804	0.27	-0.7
3,108,701	+		MIT1002_02804	0.28	+2.2
3,108,710	-		MIT1002_02804	0.29	-0.3
3,108,710	-		MIT1002_02804	0.29	+0.5
3,108,782	+		MIT1002_02804	0.34	+1.8
3,108,796	+		MIT1002_02804	0.35	-0.1
3,108,831	+		MIT1002_02804	0.37	+1.4
3,108,843	+		MIT1002_02804	0.38	+1.4
3,108,853	+		MIT1002_02804	0.38	-1.4
3,108,853	+		MIT1002_02804	0.38	+1.2
3,108,866	-		MIT1002_02804	0.39	+0.2
3,108,876	+		MIT1002_02804	0.40	-0.2
3,108,888	+		MIT1002_02804	0.41	-0.5
3,108,894	+		MIT1002_02804	0.41	-1.3
3,108,894	-		MIT1002_02804	0.41	-0.3
3,108,894	-		MIT1002_02804	0.41	+0.0
3,108,904	+		MIT1002_02804	0.42	-1.2
3,108,912	-		MIT1002_02804	0.42	+0.1
3,108,999	-		MIT1002_02804	0.48	-0.8
3,109,018	-		MIT1002_02804	0.50	+0.5
3,109,027	+		MIT1002_02804	0.50	-0.7
3,109,027	+		MIT1002_02804	0.50	+0.1
3,109,110	-		MIT1002_02804	0.56	+0.7
3,109,144	+		MIT1002_02804	0.58	+0.5
3,109,152	-		MIT1002_02804	0.59	-0.1
3,109,174	-		MIT1002_02804	0.60	-0.4
3,109,239	-		MIT1002_02804	0.65	+0.1