Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02369

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
2,647,327	+				-1.0
2,647,373	-				+0.5
2,647,384	+				+1.8
2,647,430	+				+0.6
2,647,444	-				+0.4
2,647,569	-		MIT1002_02368	0.24	-1.4
2,647,609	+		MIT1002_02368	0.29	+0.4
2,647,628	+		MIT1002_02368	0.31	+0.0
2,647,698	+		MIT1002_02368	0.40	-0.3
2,647,739	+		MIT1002_02368	0.45	-0.5
2,647,752	+		MIT1002_02368	0.46	+0.3
2,647,789	-		MIT1002_02368	0.51	+0.2
2,647,839	-		MIT1002_02368	0.57	+0.0
2,647,873	-		MIT1002_02368	0.61	-0.7
2,647,873	-		MIT1002_02368	0.61	-0.6
2,647,970	+		MIT1002_02368	0.73	+0.2
2,647,978	-		MIT1002_02368	0.74	+1.9
2,647,995	+		MIT1002_02368	0.76	+2.2
2,648,019	+		MIT1002_02368	0.78	+0.2
2,648,027	+		MIT1002_02368	0.79	+0.4
2,648,029	+		MIT1002_02368	0.80	-1.0
2,648,029	+		MIT1002_02368	0.80	-0.2
2,648,029	+		MIT1002_02368	0.80	+0.3
2,648,029	+		MIT1002_02368	0.80	+0.6
2,648,029	+		MIT1002_02368	0.80	-0.3
2,648,029	+		MIT1002_02368	0.80	+0.7
2,648,037	-		MIT1002_02368	0.81	+0.2
2,648,037	-		MIT1002_02368	0.81	+0.5
2,648,095	-		MIT1002_02368	0.88	+0.0
2,648,126	-				+1.5
2,648,126	-				+0.1
2,648,167	+				-0.2
2,648,167	+				+0.9
2,648,167	+				+0.5
2,648,167	+				-0.1
2,648,175	-				+0.6
2,648,175	-				-0.2
2,648,175	-				+0.3
2,648,175	-				+0.3
2,648,194	-				+0.9
2,648,194	-				+1.1
2,648,214	+				+0.2
2,648,247	-				-1.0
2,648,345	-		MIT1002_02369	0.12	-1.7
2,648,379	-		MIT1002_02369	0.33	-2.6
2,648,384	-		MIT1002_02369	0.36	-0.5
2,648,443	+		MIT1002_02369	0.71	-1.8
2,648,451	-		MIT1002_02369	0.76	-1.1
2,648,470	+		MIT1002_02369	0.87	-0.6
2,648,470	+		MIT1002_02369	0.87	-1.1
2,648,470	+		MIT1002_02369	0.87	-0.8
2,648,475	+				-0.7
2,648,478	-				-0.2
2,648,479	+				+1.4
2,648,487	+				-0.4
2,648,505	-				-0.5
2,648,505	-				+1.1
2,648,505	-				-1.6
2,648,505	-				-0.8
2,648,613	+				+0.1
2,648,635	-				-0.2
2,648,640	-				-0.3
2,648,646	+				-2.0
2,648,654	-				+0.4
2,648,654	-				-0.0
2,648,724	+				+0.2
2,648,782	+				-0.2
2,648,865	+				+0.2
2,648,865	+				-0.0
2,648,870	+				+0.1
2,648,872	+				+1.0
2,648,880	-				+0.4
2,648,882	+				+0.0
2,648,884	+				-0.1
2,648,890	-				+0.5
2,648,890	-				+0.9
2,648,890	-				+0.3
2,649,018	-		MIT1002_02370	0.36	-0.9
2,649,035	-		MIT1002_02370	0.40	-1.5
2,649,174	-		MIT1002_02370	0.79	-0.3
2,649,176	+		MIT1002_02370	0.80	-0.6
2,649,176	+		MIT1002_02370	0.80	-0.5
2,649,176	+		MIT1002_02370	0.80	-2.1
2,649,176	+		MIT1002_02370	0.80	-1.8
2,649,176	+		MIT1002_02370	0.80	-1.9
2,649,184	-		MIT1002_02370	0.82	-0.1
2,649,184	-		MIT1002_02370	0.82	+0.2
2,649,184	-		MIT1002_02370	0.82	+0.3
2,649,184	-		MIT1002_02370	0.82	+0.1
2,649,184	-		MIT1002_02370	0.82	+0.6
2,649,184	-		MIT1002_02370	0.82	-0.2
2,649,184	-		MIT1002_02370	0.82	-0.2
2,649,184	-		MIT1002_02370	0.82	+0.2
2,649,222	-				-0.1
2,649,324	-				-1.0
2,649,352	+				-0.5
2,649,360	-				+0.8
2,649,387	-				-1.2
2,649,450	+				-2.5
2,649,458	-				+0.2
2,649,469	+				-0.5