Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02024

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
2,263,746	-		MIT1002_02021	0.71	+0.9
2,263,780	-		MIT1002_02021	0.75	-0.3
2,263,818	-		MIT1002_02021	0.81	-0.1
2,263,896	+				-0.3
2,263,896	+				-0.9
2,263,928	+				+0.4
2,264,211	+		MIT1002_02022	0.52	-0.2
2,264,226	+		MIT1002_02022	0.56	-0.0
2,264,234	-		MIT1002_02022	0.57	+0.2
2,264,345	+		MIT1002_02022	0.82	+1.1
2,264,435	+				+0.9
2,264,457	+				-0.8
2,264,475	-		MIT1002_02023	0.15	-0.5
2,264,510	+		MIT1002_02023	0.27	+0.1
2,264,541	+		MIT1002_02023	0.38	-0.9
2,264,541	+		MIT1002_02023	0.38	-1.1
2,264,549	-		MIT1002_02023	0.41	-1.0
2,264,549	-		MIT1002_02023	0.41	+1.2
2,264,549	-		MIT1002_02023	0.41	-0.7
2,264,549	-		MIT1002_02023	0.41	+0.2
2,264,549	-		MIT1002_02023	0.41	+0.2
2,264,673	-		MIT1002_02023	0.84	+0.4
2,264,694	-				-2.8
2,264,702	-				-2.3
2,264,763	+				+0.2
2,264,771	-				-2.7
2,264,930	-		MIT1002_02024	0.29	-1.9
2,265,254	+		MIT1002_02024	0.77	-1.1
2,265,262	-		MIT1002_02024	0.78	-1.7
2,265,262	-		MIT1002_02024	0.78	-1.5
2,265,302	+		MIT1002_02024	0.84	+1.0
2,265,342	-				-2.6
2,265,390	+				+0.2
2,265,390	+				-2.0
2,265,529	-				-0.3
2,265,559	+				-0.0
2,265,567	-				-1.9
2,265,616	+		MIT1002_02025	0.10	-0.4
2,265,720	+		MIT1002_02025	0.15	-1.7
2,265,720	+		MIT1002_02025	0.15	+0.3
2,265,728	-		MIT1002_02025	0.16	-0.0
2,265,728	-		MIT1002_02025	0.16	-3.3
2,265,740	-		MIT1002_02025	0.16	+1.5
2,265,761	-		MIT1002_02025	0.17	-0.0
2,265,807	+		MIT1002_02025	0.19	+2.2
2,265,996	+		MIT1002_02025	0.29	-0.9
2,266,032	+		MIT1002_02025	0.30	-1.5
2,266,034	-		MIT1002_02025	0.31	-0.1
2,266,084	+		MIT1002_02025	0.33	+1.4
2,266,132	+		MIT1002_02025	0.35	-1.1
2,266,140	-		MIT1002_02025	0.36	-0.7
2,266,162	-		MIT1002_02025	0.37	-0.3
2,266,165	+		MIT1002_02025	0.37	-1.5
2,266,228	-		MIT1002_02025	0.40	-1.9