Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01971

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
2,204,516	-				-0.3
2,204,523	-				-0.4
2,204,799	+		MIT1002_01970	0.28	-0.8
2,204,868	+		MIT1002_01970	0.39	-0.3
2,204,879	+		MIT1002_01970	0.41	+1.4
2,205,028	-		MIT1002_01970	0.65	+0.0
2,205,028	-		MIT1002_01970	0.65	-0.5
2,205,052	-		MIT1002_01970	0.69	-1.2
2,205,059	-		MIT1002_01970	0.70	-0.7
2,205,085	+		MIT1002_01970	0.74	+0.1
2,205,208	-				+0.2
2,205,273	+				-0.7
2,205,457	-				+0.5
2,205,600	+		MIT1002_01971	0.51	-1.5
2,205,643	-		MIT1002_01971	0.63	-1.3
2,205,659	+		MIT1002_01971	0.68	-2.2
2,205,659	+		MIT1002_01971	0.68	-0.8
2,205,659	+		MIT1002_01971	0.68	-2.5
2,205,659	+		MIT1002_01971	0.68	-0.7
2,205,667	-		MIT1002_01971	0.70	-1.0
2,205,667	-		MIT1002_01971	0.70	+0.1
2,205,667	-		MIT1002_01971	0.70	-0.5
2,205,667	-		MIT1002_01971	0.70	-1.8
2,205,669	+		MIT1002_01971	0.71	+0.0
2,205,677	-		MIT1002_01971	0.73	-0.7
2,205,836	-				+0.1
2,206,045	+				-0.2
2,206,089	+		MIT1002_01972	0.11	+0.6
2,206,129	+		MIT1002_01972	0.17	-1.5
2,206,146	+		MIT1002_01972	0.19	-0.5
2,206,183	+		MIT1002_01972	0.24	+0.1
2,206,308	+		MIT1002_01972	0.40	+0.5
2,206,333	+		MIT1002_01972	0.43	+2.2
2,206,350	+		MIT1002_01972	0.46	-0.6
2,206,357	-		MIT1002_01972	0.47	-0.5
2,206,358	-		MIT1002_01972	0.47	-0.1
2,206,384	+		MIT1002_01972	0.50	-1.9
2,206,384	+		MIT1002_01972	0.50	+0.6
2,206,443	+		MIT1002_01972	0.58	-0.8
2,206,451	+		MIT1002_01972	0.59	+0.4
2,206,482	-		MIT1002_01972	0.63	-0.4
2,206,537	-		MIT1002_01972	0.70	-0.3
2,206,537	-		MIT1002_01972	0.70	+1.3
2,206,542	+		MIT1002_01972	0.71	+0.2
2,206,564	+		MIT1002_01972	0.74	+0.7
2,206,572	-		MIT1002_01972	0.75	-0.8
2,206,614	+		MIT1002_01972	0.80	-0.2
2,206,625	-		MIT1002_01972	0.82	-0.7
2,206,671	+		MIT1002_01972	0.88	-1.0
2,206,679	-		MIT1002_01972	0.89	+0.4
2,206,693	+				-1.5
2,206,693	+				-0.3
2,206,703	+				-0.0
2,206,705	+				+0.8