Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01289

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
1,423,521	+		MIT1002_01287	0.86	-1.2
1,423,567	-		MIT1002_01287	0.88	-0.1
1,423,602	+		MIT1002_01287	0.89	-1.0
1,423,602	+		MIT1002_01287	0.89	+0.1
1,423,602	+		MIT1002_01287	0.89	+0.4
1,423,610	-		MIT1002_01287	0.90	+0.4
1,423,610	-		MIT1002_01287	0.90	-1.3
1,423,660	-				-0.5
1,423,660	-				-1.6
1,423,667	-				-1.9
1,423,733	+				-1.9
1,423,741	+				-1.3
1,423,778	+				+0.6
1,424,005	+				+2.0
1,424,024	+				-0.1
1,424,051	+				+0.7
1,424,066	-		MIT1002_01288	0.15	+1.5
1,424,173	-		MIT1002_01288	0.69	-0.5
1,424,189	-		MIT1002_01288	0.77	-0.8
1,424,194	-		MIT1002_01288	0.80	-0.7
1,424,196	+		MIT1002_01288	0.81	-0.6
1,424,198	+		MIT1002_01288	0.82	+0.5
1,424,223	-				-0.4
1,424,358	-		MIT1002_01289	0.16	+0.9
1,424,367	+		MIT1002_01289	0.21	-2.8
1,424,385	+		MIT1002_01289	0.32	+1.2
1,424,427	+		MIT1002_01289	0.58	-0.0
1,424,716	+				+1.1
1,424,734	-				-0.6
1,424,755	-				-0.2
1,424,757	+				-0.7
1,424,762	+				+0.5
1,424,868	+				-0.9
1,424,887	+				+0.7
1,424,930	+				-0.0
1,424,938	-				+0.0
1,425,019	-				-1.7
1,425,032	-				+2.3
1,425,032	-				-0.1
1,425,032	-				-0.2
1,425,082	-				+0.2
1,425,101	-				+0.4
1,425,111	-				-0.6
1,425,224	+				+1.5
1,425,228	+				+0.7
1,425,309	-		MIT1002_01290	0.11	+0.2
1,425,309	-		MIT1002_01290	0.11	-0.2
1,425,322	-		MIT1002_01290	0.12	-3.8
1,425,348	-		MIT1002_01290	0.12	+0.3
1,425,450	-		MIT1002_01290	0.14	-0.7