Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01279

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
1,409,363	+		MIT1002_01277	0.57	-0.5
1,409,726	+		MIT1002_01278	0.12	+0.9
1,409,816	+		MIT1002_01278	0.28	-0.5
1,409,817	-		MIT1002_01278	0.29	-0.4
1,409,818	+		MIT1002_01278	0.29	-0.1
1,409,818	+		MIT1002_01278	0.29	+0.5
1,409,818	-		MIT1002_01278	0.29	+1.5
1,409,827	+		MIT1002_01278	0.30	+2.3
1,409,835	-		MIT1002_01278	0.32	-0.3
1,409,835	-		MIT1002_01278	0.32	+0.3
1,409,843	+		MIT1002_01278	0.33	+0.2
1,409,878	+		MIT1002_01278	0.40	+0.4
1,409,931	-		MIT1002_01278	0.49	+0.1
1,409,933	+		MIT1002_01278	0.49	-0.5
1,409,933	+		MIT1002_01278	0.49	+1.1
1,409,939	-		MIT1002_01278	0.51	+0.7
1,409,939	-		MIT1002_01278	0.51	+0.0
1,409,997	-		MIT1002_01278	0.61	-0.6
1,410,022	+		MIT1002_01278	0.65	+0.2
1,410,077	+		MIT1002_01278	0.75	-0.6
1,410,077	+		MIT1002_01278	0.75	+0.6
1,410,085	-		MIT1002_01278	0.77	-1.0
1,410,085	-		MIT1002_01278	0.77	-0.9
1,410,108	+		MIT1002_01278	0.81	+0.7
1,410,121	+		MIT1002_01278	0.83	-2.0
1,410,179	+				-1.4
1,410,182	-				-0.1
1,410,187	-				+0.2
1,410,187	-				+0.1
1,410,187	-				-1.2
1,410,315	-				-2.0
1,410,321	-				+0.4
1,410,395	+				+0.5
1,410,398	-				-1.0
1,410,403	+				-1.6
1,410,411	-				+0.5
1,410,411	-				+0.3
1,410,467	+				+0.5
1,410,506	+				-0.1
1,410,506	+				+1.7
1,410,507	-				-0.7
1,410,507	-				-0.3
1,410,640	+		MIT1002_01279	0.17	-0.4
1,410,752	+		MIT1002_01279	0.23	-0.8
1,410,752	-		MIT1002_01279	0.23	-0.9
1,410,780	-		MIT1002_01279	0.24	+0.5
1,410,847	-		MIT1002_01279	0.28	+0.2
1,410,898	-		MIT1002_01279	0.31	-1.6
1,410,899	+		MIT1002_01279	0.31	-0.4
1,410,907	-		MIT1002_01279	0.31	+0.7
1,410,914	-		MIT1002_01279	0.31	-0.6
1,410,924	-		MIT1002_01279	0.32	-0.1
1,410,939	+		MIT1002_01279	0.33	-1.1
1,410,945	-		MIT1002_01279	0.33	-0.1
1,410,989	+		MIT1002_01279	0.35	+0.1
1,410,997	-		MIT1002_01279	0.36	-0.0
1,411,038	+		MIT1002_01279	0.38	-1.4
1,411,088	+		MIT1002_01279	0.41	-0.4
1,411,098	-		MIT1002_01279	0.41	+0.4
1,411,120	-		MIT1002_01279	0.43	-0.3
1,411,159	+		MIT1002_01279	0.45	+0.5
1,411,159	+		MIT1002_01279	0.45	-0.3
1,411,234	-		MIT1002_01279	0.49	+0.1
1,411,239	-		MIT1002_01279	0.49	+0.1
1,411,274	-		MIT1002_01279	0.51	-1.3
1,411,274	-		MIT1002_01279	0.51	+0.7
1,411,283	-		MIT1002_01279	0.51	+1.2
1,411,311	-		MIT1002_01279	0.53	+0.1
1,411,324	+		MIT1002_01279	0.54	-0.2
1,411,324	+		MIT1002_01279	0.54	+0.1
1,411,326	+		MIT1002_01279	0.54	+1.0
1,411,332	-		MIT1002_01279	0.54	-0.5
1,411,344	-		MIT1002_01279	0.55	-0.6
1,411,409	-		MIT1002_01279	0.58	+0.7
1,411,458	+		MIT1002_01279	0.61	+0.2
1,411,460	+		MIT1002_01279	0.61	+0.9
1,411,468	-		MIT1002_01279	0.61	+0.3
1,411,584	+		MIT1002_01279	0.68	-3.0
1,411,681	-		MIT1002_01279	0.73	+0.8
1,411,681	-		MIT1002_01279	0.73	+0.0
1,411,681	-		MIT1002_01279	0.73	+0.4
1,411,727	+		MIT1002_01279	0.75	-0.7
1,411,756	-		MIT1002_01279	0.77	+0.7
1,411,761	-		MIT1002_01279	0.77	-0.2
1,411,842	-		MIT1002_01279	0.81	-0.3
1,411,931	+		MIT1002_01279	0.86	+0.2
1,412,007	-				+0.2
1,412,034	+				-0.4
1,412,048	+				-0.5
1,412,048	+				-0.1
1,412,048	+				-1.2
1,412,056	-				-0.5
1,412,056	-				+0.1
1,412,056	-				-0.3
1,412,138	+				+0.7
1,412,146	-				+1.0
1,412,170	-				-0.5
1,412,229	-				+0.2
1,412,245	+				-1.3
1,412,245	+				-0.3
1,412,253	-				+0.0
1,412,253	-				-0.0
1,412,253	-				-0.2
1,412,253	-				+1.2
1,412,253	-				+0.4
1,412,255	+				+0.5
1,412,279	-				+1.7
1,412,312	+				+0.0
1,412,312	-				+0.0
1,412,320	-				+0.1
1,412,320	-				-0.9
1,412,464	+				+0.5
1,412,496	+				+0.1
1,412,504	-				+0.1
1,412,553	+				-1.3
1,412,553	+				-0.0
1,412,553	+				-0.1
1,412,561	-				+0.1
1,412,561	-				-0.0
1,412,561	-				+0.6
1,412,599	+		MIT1002_01280	0.11	-0.5
1,412,635	+		MIT1002_01280	0.13	-0.3
1,412,643	-		MIT1002_01280	0.14	+0.9
1,412,719	+		MIT1002_01280	0.18	-0.5
1,412,727	-		MIT1002_01280	0.19	-0.9
1,412,727	-		MIT1002_01280	0.19	+1.2
1,412,740	+		MIT1002_01280	0.19	+0.1
1,412,748	-		MIT1002_01280	0.20	-0.4
1,412,748	-		MIT1002_01280	0.20	+0.6
1,412,748	-		MIT1002_01280	0.20	-0.8
1,412,772	+		MIT1002_01280	0.21	-1.3
1,412,780	-		MIT1002_01280	0.21	+2.8
1,412,829	+		MIT1002_01280	0.24	-0.5
1,412,845	+		MIT1002_01280	0.25	+0.3
1,412,848	+		MIT1002_01280	0.25	-0.3
1,412,853	+		MIT1002_01280	0.25	+0.0
1,412,856	-		MIT1002_01280	0.26	-0.2
1,412,883	-		MIT1002_01280	0.27	-1.1
1,412,899	+		MIT1002_01280	0.28	+1.5
1,412,912	+		MIT1002_01280	0.29	-1.6
1,412,912	+		MIT1002_01280	0.29	-1.7
1,412,912	+		MIT1002_01280	0.29	-2.2
1,412,912	+		MIT1002_01280	0.29	+1.9
1,412,912	+		MIT1002_01280	0.29	+0.6
1,412,912	+		MIT1002_01280	0.29	-0.8
1,412,919	+		MIT1002_01280	0.29	+3.2
1,412,919	+		MIT1002_01280	0.29	-2.1
1,412,920	-		MIT1002_01280	0.29	+0.3
1,412,920	-		MIT1002_01280	0.29	+0.2
1,412,920	-		MIT1002_01280	0.29	+0.6
1,412,920	-		MIT1002_01280	0.29	+0.1
1,412,920	-		MIT1002_01280	0.29	-0.8
1,412,920	-		MIT1002_01280	0.29	-1.7
1,412,920	-		MIT1002_01280	0.29	-0.6
1,412,927	-		MIT1002_01280	0.29	-0.5
1,412,927	-		MIT1002_01280	0.29	-1.5
1,412,927	-		MIT1002_01280	0.29	-1.9
1,412,943	+		MIT1002_01280	0.30	+0.7
1,412,951	-		MIT1002_01280	0.31	-2.9
1,412,953	+		MIT1002_01280	0.31	-0.9
1,413,017	+		MIT1002_01280	0.34	-0.8
1,413,017	+		MIT1002_01280	0.34	+0.6
1,413,026	+		MIT1002_01280	0.35	+0.2
1,413,088	-		MIT1002_01280	0.38	+0.3
1,413,157	-		MIT1002_01280	0.42	+1.0
1,413,174	-		MIT1002_01280	0.43	-1.5