Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12655

Experiment: biofilm; Day4; SGW; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day4; SGW; Aluminum chloride 1mM
2,799,294	+		LRK53_RS12645	0.61	-0.4
2,799,294	+		LRK53_RS12645	0.61	-0.6
2,799,294	+		LRK53_RS12645	0.61	+0.3
2,799,379	-		LRK53_RS12645	0.78	+0.9
2,799,390	+		LRK53_RS12645	0.80	-0.1
2,799,390	+		LRK53_RS12645	0.80	-2.7
2,799,390	+		LRK53_RS12645	0.80	+0.7
2,799,390	+		LRK53_RS12645	0.80	+0.6
2,799,390	+		LRK53_RS12645	0.80	+0.0
2,799,390	+		LRK53_RS12645	0.80	+1.1
2,799,391	-		LRK53_RS12645	0.80	+0.2
2,799,391	-		LRK53_RS12645	0.80	-1.2
2,799,391	-		LRK53_RS12645	0.80	+0.6
2,799,391	-		LRK53_RS12645	0.80	-1.5
2,799,408	+		LRK53_RS12645	0.83	+1.0
2,799,409	-		LRK53_RS12645	0.84	-2.2
2,799,610	+		LRK53_RS12650	0.16	-1.4
2,799,610	+		LRK53_RS12650	0.16	-1.9
2,799,610	+		LRK53_RS12650	0.16	+1.4
2,799,610	+		LRK53_RS12650	0.16	-0.2
2,799,610	+		LRK53_RS12650	0.16	-0.9
2,799,610	+		LRK53_RS12650	0.16	+0.3
2,799,610	+		LRK53_RS12650	0.16	-0.2
2,799,610	+		LRK53_RS12650	0.16	-1.0
2,799,610	+		LRK53_RS12650	0.16	+0.8
2,799,610	+		LRK53_RS12650	0.16	-2.1
2,799,610	+		LRK53_RS12650	0.16	-0.3
2,799,610	+		LRK53_RS12650	0.16	+0.4
2,799,611	-		LRK53_RS12650	0.16	+1.0
2,799,611	-		LRK53_RS12650	0.16	-1.1
2,799,611	-		LRK53_RS12650	0.16	-1.4
2,799,611	-		LRK53_RS12650	0.16	-0.4
2,799,611	-		LRK53_RS12650	0.16	-1.4
2,799,611	-		LRK53_RS12650	0.16	-0.6
2,799,611	-		LRK53_RS12650	0.16	+0.3
2,799,611	-		LRK53_RS12650	0.16	+0.6
2,799,611	-		LRK53_RS12650	0.16	-0.9
2,799,611	-		LRK53_RS12650	0.16	+0.1
2,799,611	-		LRK53_RS12650	0.16	+1.7
2,799,611	-		LRK53_RS12650	0.16	-1.5
2,799,611	-		LRK53_RS12650	0.16	-0.6
2,799,611	-		LRK53_RS12650	0.16	+0.4
2,799,617	-		LRK53_RS12650	0.17	-1.4
2,799,628	+		LRK53_RS12650	0.19	+0.4
2,799,628	+		LRK53_RS12650	0.19	-0.7
2,799,925	-		LRK53_RS12650	0.70	+0.1
2,799,925	-		LRK53_RS12650	0.70	-0.5
2,799,925	-		LRK53_RS12650	0.70	-0.0
2,799,952	+		LRK53_RS12650	0.75	-0.6
2,799,952	+		LRK53_RS12650	0.75	-0.8
2,799,952	+		LRK53_RS12650	0.75	+1.1
2,799,952	+		LRK53_RS12650	0.75	+0.2
2,799,952	+		LRK53_RS12650	0.75	+0.7
2,799,952	+		LRK53_RS12650	0.75	-2.4
2,799,952	+		LRK53_RS12650	0.75	-0.9
2,799,952	+		LRK53_RS12650	0.75	+0.2
2,799,952	+		LRK53_RS12650	0.75	+0.1
2,799,952	+		LRK53_RS12650	0.75	+0.6
2,799,952	+		LRK53_RS12650	0.75	+0.9
2,799,952	+		LRK53_RS12650	0.75	+1.3
2,799,952	+		LRK53_RS12650	0.75	+0.6
2,799,953	-		LRK53_RS12650	0.75	-0.4
2,799,953	-		LRK53_RS12650	0.75	-0.8
2,799,953	-		LRK53_RS12650	0.75	+0.2
2,799,953	-		LRK53_RS12650	0.75	-0.5
2,799,953	-		LRK53_RS12650	0.75	+0.2
2,799,953	-		LRK53_RS12650	0.75	-0.4
2,799,953	-		LRK53_RS12650	0.75	-1.0
2,799,953	-		LRK53_RS12650	0.75	-2.6
2,799,953	-		LRK53_RS12650	0.75	-1.0
2,799,953	-		LRK53_RS12650	0.75	-0.0
2,799,953	-		LRK53_RS12650	0.75	+0.2
2,800,051	-				-0.4
2,800,074	+				-1.5
2,800,074	+				-3.0
2,800,074	+				-2.5
2,800,074	+				-0.7
2,800,074	+				-1.2
2,800,074	+				+0.8
2,800,075	-				-0.0
2,800,075	-				-0.7
2,800,075	-				-0.2
2,800,075	-				-0.0
2,800,075	-				+2.5
2,800,075	-				-0.4
2,800,075	-				-0.6
2,800,075	-				-1.8
2,800,075	-				+1.0
2,800,075	-				-1.1
2,800,075	-				-0.3
2,800,075	-				-1.7
2,800,075	-				+0.2
2,800,075	-				+0.2
2,800,075	-				-1.3
2,800,161	+				+2.1
2,800,161	+				+0.4
2,800,161	+				+0.4
2,800,161	+				-0.4
2,800,161	+				-0.2
2,800,161	+				-0.7
2,800,161	+				-0.3
2,800,161	+				-2.6
2,800,161	+				-1.5
2,800,162	-				-0.3
2,800,162	-				-0.3
2,800,162	-				-0.4
2,800,162	-				+2.2
2,800,162	-				-1.4
2,800,203	+				+0.6
2,800,203	+				+2.0
2,800,203	+				-0.8
2,800,203	+				-2.3
2,800,203	+				-1.4
2,800,203	+				-1.8
2,800,203	+				-1.2
2,800,203	+				-0.7
2,800,203	+				-0.1
2,800,203	+				+0.2
2,800,204	-				-1.3
2,800,204	-				-1.1
2,800,217	+				+0.6
2,800,217	+				-0.4
2,800,218	-				-1.9
2,800,218	-				+0.4
2,800,218	-				-1.3
2,800,218	-				-1.4
2,800,222	+				+2.4
2,800,222	+				+1.2
2,800,222	+				-1.0
2,800,223	-				+0.2
2,800,223	-				-2.7
2,800,223	-				-0.2
2,800,457	+		LRK53_RS12655	0.26	-1.0
2,800,692	+		LRK53_RS12655	0.55	-1.3
2,800,692	+		LRK53_RS12655	0.55	-1.0
2,800,692	+		LRK53_RS12655	0.55	-2.5
2,800,811	+		LRK53_RS12655	0.71	-1.9
2,800,811	+		LRK53_RS12655	0.71	-0.4
2,800,811	+		LRK53_RS12655	0.71	-1.7
2,800,811	+		LRK53_RS12655	0.71	-1.4
2,800,811	+		LRK53_RS12655	0.71	+1.0
2,800,811	+		LRK53_RS12655	0.71	-1.0
2,800,812	-		LRK53_RS12655	0.71	-1.0
2,800,812	-		LRK53_RS12655	0.71	-2.1
2,801,200	+				+0.2
2,801,200	+				-0.8
2,801,200	+				-0.2
2,801,200	+				+0.3
2,801,200	+				-0.4
2,801,200	+				-2.4
2,801,200	+				-0.2
2,801,200	+				-1.7
2,801,201	-				+1.7
2,801,201	-				-0.4
2,801,239	+				-0.0
2,801,239	+				-1.5
2,801,239	+				+1.7
2,801,246	+				+0.6
2,801,247	-				-0.0
2,801,247	-				+2.3
2,801,262	+				+0.1
2,801,262	+				+0.4
2,801,262	+				+0.1
2,801,262	+				-2.3
2,801,262	+				-0.9
2,801,262	+				-0.6
2,801,262	+				-1.7
2,801,262	+				-0.2
2,801,263	-				-0.4
2,801,263	-				-0.2
2,801,449	+		LRK53_RS12660	0.33	+0.9
2,801,449	+		LRK53_RS12660	0.33	-0.8
2,801,450	-		LRK53_RS12660	0.33	-1.8
2,801,450	-		LRK53_RS12660	0.33	-0.4
2,801,450	-		LRK53_RS12660	0.33	-2.1
2,801,477	+		LRK53_RS12660	0.38	-0.1
2,801,477	+		LRK53_RS12660	0.38	-1.9
2,801,477	+		LRK53_RS12660	0.38	+0.4
2,801,477	+		LRK53_RS12660	0.38	-0.9
2,801,478	-		LRK53_RS12660	0.38	+0.8
2,801,478	-		LRK53_RS12660	0.38	-0.1
2,801,478	-		LRK53_RS12660	0.38	-2.0
2,801,478	-		LRK53_RS12660	0.38	+0.1
2,801,478	-		LRK53_RS12660	0.38	-0.2
2,801,522	+		LRK53_RS12660	0.47	-0.3
2,801,522	+		LRK53_RS12660	0.47	-1.8
2,801,522	+		LRK53_RS12660	0.47	-0.4
2,801,522	+		LRK53_RS12660	0.47	+0.1
2,801,522	+		LRK53_RS12660	0.47	-0.9
2,801,522	+		LRK53_RS12660	0.47	-1.8
2,801,522	+		LRK53_RS12660	0.47	+1.4
2,801,522	+		LRK53_RS12660	0.47	-1.4
2,801,522	+		LRK53_RS12660	0.47	-0.1
2,801,522	+		LRK53_RS12660	0.47	-0.7
2,801,523	-		LRK53_RS12660	0.47	-2.2
2,801,523	-		LRK53_RS12660	0.47	-1.6
2,801,523	-		LRK53_RS12660	0.47	-0.2
2,801,523	-		LRK53_RS12660	0.47	-0.8
2,801,523	-		LRK53_RS12660	0.47	-2.9
2,801,523	-		LRK53_RS12660	0.47	-0.2
2,801,523	-		LRK53_RS12660	0.47	-0.4
2,801,992	+		LRK53_RS12665	0.12	-0.4
2,801,992	+		LRK53_RS12665	0.12	-1.6