Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS01430 and QEN71_RS01435 are separated by 3 nucleotides QEN71_RS01435 and QEN71_RS01440 are separated by 144 nucleotides QEN71_RS01440 and QEN71_RS01445 are separated by 394 nucleotides
QEN71_RS01430: QEN71_RS01430 - phosphoenolpyruvate--protein phosphotransferase, at 320,790 to 322,532
_RS01430
QEN71_RS01435: QEN71_RS01435 - molybdopterin-synthase adenylyltransferase MoeB, at 322,536 to 323,294
_RS01435
QEN71_RS01440: QEN71_RS01440 - S41 family peptidase, at 323,439 to 325,031
_RS01440
QEN71_RS01445: QEN71_RS01445 - 2,3-diphosphoglycerate-dependent phosphoglycerate mutase, at 325,426 to 326,172
_RS01445
Position (kb) 323
324
325
326 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 322.537 kb on + strand at 322.537 kb on + strand at 322.538 kb on - strand at 323.357 kb on + strand at 323.357 kb on + strand at 323.357 kb on + strand at 323.357 kb on + strand at 323.358 kb on - strand at 323.358 kb on - strand at 323.358 kb on - strand at 323.358 kb on - strand at 323.362 kb on + strand at 323.426 kb on + strand at 323.426 kb on + strand at 323.427 kb on - strand at 323.427 kb on - strand at 323.440 kb on + strand at 323.440 kb on + strand at 323.440 kb on + strand at 323.440 kb on + strand at 323.440 kb on + strand at 323.440 kb on + strand at 323.440 kb on + strand at 323.440 kb on + strand at 323.440 kb on + strand at 323.440 kb on + strand at 323.441 kb on - strand at 323.441 kb on - strand at 323.441 kb on - strand at 323.441 kb on - strand at 323.441 kb on - strand at 323.441 kb on - strand at 323.441 kb on - strand at 323.441 kb on - strand at 323.441 kb on - strand at 323.944 kb on + strand, within QEN71_RS01440 at 323.945 kb on - strand, within QEN71_RS01440 at 323.947 kb on + strand, within QEN71_RS01440 at 324.098 kb on - strand, within QEN71_RS01440 at 324.184 kb on + strand, within QEN71_RS01440 at 324.184 kb on + strand, within QEN71_RS01440 at 324.184 kb on + strand, within QEN71_RS01440 at 324.184 kb on + strand, within QEN71_RS01440 at 324.184 kb on + strand, within QEN71_RS01440 at 324.185 kb on - strand, within QEN71_RS01440 at 324.194 kb on - strand, within QEN71_RS01440 at 324.318 kb on - strand, within QEN71_RS01440 at 324.427 kb on + strand, within QEN71_RS01440 at 324.428 kb on - strand, within QEN71_RS01440 at 324.428 kb on - strand, within QEN71_RS01440 at 324.428 kb on - strand, within QEN71_RS01440 at 324.428 kb on - strand, within QEN71_RS01440 at 324.428 kb on - strand, within QEN71_RS01440 at 324.766 kb on + strand, within QEN71_RS01440 at 324.766 kb on + strand, within QEN71_RS01440 at 324.767 kb on - strand, within QEN71_RS01440 at 324.865 kb on + strand, within QEN71_RS01440 at 324.865 kb on + strand, within QEN71_RS01440 at 324.865 kb on + strand, within QEN71_RS01440 at 324.866 kb on - strand, within QEN71_RS01440 at 324.866 kb on - strand, within QEN71_RS01440 at 324.866 kb on - strand, within QEN71_RS01440 at 324.866 kb on - strand, within QEN71_RS01440 at 324.866 kb on - strand, within QEN71_RS01440 at 325.031 kb on + strand at 325.032 kb on - strand at 325.032 kb on - strand at 325.036 kb on + strand at 325.036 kb on + strand at 325.036 kb on + strand at 325.036 kb on + strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.037 kb on - strand at 325.088 kb on + strand at 325.088 kb on + strand at 325.088 kb on + strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.089 kb on - strand at 325.090 kb on + strand at 325.090 kb on + strand at 325.090 kb on + strand at 325.090 kb on + strand at 325.090 kb on + strand at 325.090 kb on + strand at 325.090 kb on + strand at 325.090 kb on + strand at 325.090 kb on + strand at 325.090 kb on + strand at 325.091 kb on - strand at 325.091 kb on - strand at 325.091 kb on - strand at 325.091 kb on - strand at 325.091 kb on - strand at 325.091 kb on - strand at 325.091 kb on - strand at 325.091 kb on - strand at 325.091 kb on - strand at 325.113 kb on + strand at 325.113 kb on + strand at 325.113 kb on + strand at 325.113 kb on + strand at 325.113 kb on + strand at 325.113 kb on + strand at 325.113 kb on + strand at 325.113 kb on + strand at 325.113 kb on + strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.114 kb on - strand at 325.159 kb on + strand at 325.159 kb on + strand at 325.159 kb on + strand at 325.159 kb on + strand at 325.159 kb on + strand at 325.159 kb on + strand at 325.159 kb on + strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.251 kb on + strand at 325.251 kb on + strand at 325.252 kb on - strand at 325.252 kb on - strand at 325.252 kb on - strand at 325.252 kb on - strand at 325.270 kb on - strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.277 kb on + strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.278 kb on - strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.279 kb on + strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.280 kb on - strand at 325.317 kb on + strand at 325.317 kb on + strand at 325.317 kb on + strand at 325.318 kb on - strand at 325.318 kb on - strand at 325.318 kb on - strand at 325.405 kb on + strand at 325.493 kb on + strand at 325.493 kb on + strand at 325.493 kb on + strand at 325.493 kb on + strand at 325.493 kb on + strand at 325.494 kb on - strand at 325.494 kb on - strand at 325.494 kb on - strand at 325.494 kb on - strand at 325.494 kb on - strand at 325.494 kb on - strand at 325.496 kb on + strand at 325.497 kb on - strand at 325.532 kb on + strand, within QEN71_RS01445 at 325.533 kb on - strand, within QEN71_RS01445 at 325.775 kb on + strand, within QEN71_RS01445 at 325.775 kb on + strand, within QEN71_RS01445 at 325.776 kb on - strand, within QEN71_RS01445 at 325.776 kb on - strand, within QEN71_RS01445 at 325.904 kb on + strand, within QEN71_RS01445 at 325.905 kb on - strand, within QEN71_RS01445 at 325.905 kb on - strand, within QEN71_RS01445 at 325.946 kb on + strand, within QEN71_RS01445 at 326.011 kb on - strand, within QEN71_RS01445 at 326.011 kb on - strand, within QEN71_RS01445
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 322,537 + +0.7 322,537 + -0.0 322,538 - -0.1 323,357 + +0.4 323,357 + -0.9 323,357 + -0.5 323,357 + +1.6 323,358 - +0.7 323,358 - -1.1 323,358 - +0.3 323,358 - +0.7 323,362 + -0.3 323,426 + -1.7 323,426 + -0.4 323,427 - -0.1 323,427 - +1.0 323,440 + -0.1 323,440 + -0.2 323,440 + -1.6 323,440 + +0.1 323,440 + -0.0 323,440 + -3.1 323,440 + -0.2 323,440 + -0.3 323,440 + -0.4 323,440 + -0.7 323,441 - -1.0 323,441 - -0.1 323,441 - -2.8 323,441 - +0.6 323,441 - -0.4 323,441 - -1.3 323,441 - +0.0 323,441 - +0.0 323,441 - -0.6 323,944 + QEN71_RS01440 0.32 -0.1 323,945 - QEN71_RS01440 0.32 -0.7 323,947 + QEN71_RS01440 0.32 -1.3 324,098 - QEN71_RS01440 0.41 -1.3 324,184 + QEN71_RS01440 0.47 -1.1 324,184 + QEN71_RS01440 0.47 -0.7 324,184 + QEN71_RS01440 0.47 -1.1 324,184 + QEN71_RS01440 0.47 -1.0 324,184 + QEN71_RS01440 0.47 -1.0 324,185 - QEN71_RS01440 0.47 -0.1 324,194 - QEN71_RS01440 0.47 -1.1 324,318 - QEN71_RS01440 0.55 -0.7 324,427 + QEN71_RS01440 0.62 -0.7 324,428 - QEN71_RS01440 0.62 -0.5 324,428 - QEN71_RS01440 0.62 -1.6 324,428 - QEN71_RS01440 0.62 -2.0 324,428 - QEN71_RS01440 0.62 -0.1 324,428 - QEN71_RS01440 0.62 -2.1 324,766 + QEN71_RS01440 0.83 -0.7 324,766 + QEN71_RS01440 0.83 -0.5 324,767 - QEN71_RS01440 0.83 -0.6 324,865 + QEN71_RS01440 0.90 -0.5 324,865 + QEN71_RS01440 0.90 -1.3 324,865 + QEN71_RS01440 0.90 -2.4 324,866 - QEN71_RS01440 0.90 -1.3 324,866 - QEN71_RS01440 0.90 -0.1 324,866 - QEN71_RS01440 0.90 -0.5 324,866 - QEN71_RS01440 0.90 -0.7 324,866 - QEN71_RS01440 0.90 -0.1 325,031 + -1.0 325,032 - -0.9 325,032 - +1.1 325,036 + -1.0 325,036 + -0.5 325,036 + -0.7 325,036 + -1.0 325,037 - -1.2 325,037 - +1.2 325,037 - +2.0 325,037 - -0.1 325,037 - -1.2 325,037 - -0.7 325,037 - -0.5 325,037 - -0.2 325,037 - -0.3 325,037 - +0.2 325,037 - +0.1 325,037 - -1.5 325,037 - +0.9 325,037 - +0.2 325,037 - -1.4 325,037 - -0.3 325,037 - +0.3 325,037 - +0.8 325,037 - -1.1 325,037 - -1.7 325,037 - +0.9 325,037 - +0.2 325,037 - -0.1 325,037 - -0.1 325,037 - -0.7 325,088 + -0.1 325,088 + -1.5 325,088 + -2.7 325,089 - -1.5 325,089 - -0.9 325,089 - -0.1 325,089 - -0.2 325,089 - -0.1 325,089 - +1.3 325,089 - -0.0 325,089 - -0.7 325,089 - -0.6 325,089 - +0.3 325,089 - -0.1 325,089 - -0.8 325,089 - -1.3 325,089 - -2.0 325,090 + -0.5 325,090 + -1.6 325,090 + +0.4 325,090 + -1.7 325,090 + +0.2 325,090 + -0.5 325,090 + +0.2 325,090 + +0.1 325,090 + +1.0 325,090 + +0.5 325,091 - +0.6 325,091 - +0.3 325,091 - -0.1 325,091 - +0.6 325,091 - +0.4 325,091 - -0.1 325,091 - +0.3 325,091 - -0.6 325,091 - +0.9 325,113 + -0.8 325,113 + +1.1 325,113 + -0.6 325,113 + -3.0 325,113 + -1.1 325,113 + -0.1 325,113 + -1.7 325,113 + +0.4 325,113 + -0.7 325,114 - -0.1 325,114 - +0.5 325,114 - +0.7 325,114 - -0.7 325,114 - +0.5 325,114 - +0.2 325,114 - -0.2 325,114 - -0.2 325,114 - +0.1 325,114 - -0.1 325,114 - -1.0 325,114 - +0.1 325,114 - +0.6 325,114 - +0.7 325,159 + -0.7 325,159 + -0.1 325,159 + +0.2 325,159 + -0.3 325,159 + +0.0 325,159 + +2.1 325,159 + -1.1 325,160 - +1.4 325,160 - +0.1 325,160 - +1.0 325,160 - +0.9 325,160 - +0.8 325,160 - -1.5 325,160 - +2.0 325,160 - -0.1 325,160 - +1.1 325,251 + -0.4 325,251 + +0.1 325,252 - +0.6 325,252 - +1.4 325,252 - +2.1 325,252 - -1.1 325,270 - -0.1 325,277 + -1.3 325,277 + +1.9 325,277 + +0.9 325,277 + +0.1 325,277 + +0.3 325,277 + +0.9 325,277 + -1.0 325,277 + +0.0 325,277 + -0.5 325,277 + -0.7 325,277 + +2.0 325,277 + -1.1 325,277 + -1.3 325,277 + -1.7 325,277 + -0.0 325,277 + -2.1 325,277 + -0.7 325,278 - +0.7 325,278 - -0.0 325,278 - +0.9 325,278 - -0.2 325,278 - -0.1 325,278 - -0.5 325,278 - -0.0 325,278 - +0.5 325,278 - +1.2 325,278 - +0.4 325,278 - -0.7 325,278 - +0.5 325,278 - +0.0 325,278 - +0.1 325,279 + -0.4 325,279 + -0.4 325,279 + -0.5 325,279 + -1.5 325,279 + -0.4 325,279 + -1.0 325,279 + -0.9 325,279 + -0.7 325,279 + -1.6 325,279 + -0.7 325,279 + -0.1 325,279 + +0.1 325,279 + -1.1 325,279 + +0.4 325,279 + +0.6 325,279 + +0.3 325,279 + +0.9 325,279 + -1.4 325,279 + -0.8 325,279 + +0.2 325,279 + -2.3 325,280 - +0.6 325,280 - -2.1 325,280 - -0.6 325,280 - -1.6 325,280 - -2.0 325,280 - -0.5 325,280 - +0.7 325,280 - +0.6 325,280 - -0.3 325,280 - +0.2 325,280 - -0.4 325,280 - +0.1 325,280 - -1.5 325,280 - +2.4 325,280 - -0.8 325,280 - +0.6 325,280 - -0.8 325,280 - -0.7 325,317 + -0.3 325,317 + -0.3 325,317 + -0.1 325,318 - -0.1 325,318 - +2.2 325,318 - -1.3 325,405 + -2.0 325,493 + -4.6 325,493 + -2.4 325,493 + -3.7 325,493 + -1.0 325,493 + -3.5 325,494 - -2.8 325,494 - -3.1 325,494 - -1.3 325,494 - -1.6 325,494 - -2.7 325,494 - -3.4 325,496 + -3.0 325,497 - -3.7 325,532 + QEN71_RS01445 0.14 -4.7 325,533 - QEN71_RS01445 0.14 -1.7 325,775 + QEN71_RS01445 0.47 -2.8 325,775 + QEN71_RS01445 0.47 -3.7 325,776 - QEN71_RS01445 0.47 -2.1 325,776 - QEN71_RS01445 0.47 -3.5 325,904 + QEN71_RS01445 0.64 -3.4 325,905 - QEN71_RS01445 0.64 -1.1 325,905 - QEN71_RS01445 0.64 -5.2 325,946 + QEN71_RS01445 0.70 -2.7 326,011 - QEN71_RS01445 0.78 -2.4 326,011 - QEN71_RS01445 0.78 -3.9
Or see this region's nucleotide sequence