Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS01415 and QEN71_RS01420 are separated by 280 nucleotides QEN71_RS01420 and QEN71_RS01425 are separated by 59 nucleotides QEN71_RS01425 and QEN71_RS01430 are separated by 219 nucleotides
QEN71_RS01415: QEN71_RS01415 - glutathione synthase, at 318,492 to 319,448
_RS01415
QEN71_RS01420: QEN71_RS01420 - PTS sugar transporter subunit IIB, at 319,729 to 320,241
_RS01420
QEN71_RS01425: QEN71_RS01425 - HPr family phosphocarrier protein, at 320,301 to 320,570
_RS01425
QEN71_RS01430: QEN71_RS01430 - phosphoenolpyruvate--protein phosphotransferase, at 320,790 to 322,532
_RS01430
Position (kb) 320
321 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 319.429 kb on + strand at 319.429 kb on + strand at 319.429 kb on + strand at 319.429 kb on + strand at 319.429 kb on + strand at 319.430 kb on - strand at 319.430 kb on - strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.541 kb on + strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.542 kb on - strand at 319.569 kb on + strand at 319.569 kb on + strand at 319.570 kb on - strand at 319.678 kb on + strand at 319.678 kb on + strand at 319.678 kb on + strand at 319.678 kb on + strand at 319.679 kb on - strand at 319.679 kb on - strand at 319.679 kb on - strand at 319.679 kb on - strand at 319.679 kb on - strand at 319.795 kb on - strand, within QEN71_RS01420 at 319.795 kb on - strand, within QEN71_RS01420 at 319.795 kb on - strand, within QEN71_RS01420 at 319.799 kb on - strand, within QEN71_RS01420 at 320.036 kb on - strand, within QEN71_RS01420 at 320.157 kb on + strand, within QEN71_RS01420 at 320.157 kb on + strand, within QEN71_RS01420 at 320.157 kb on + strand, within QEN71_RS01420 at 320.157 kb on + strand, within QEN71_RS01420 at 320.157 kb on + strand, within QEN71_RS01420 at 320.157 kb on + strand, within QEN71_RS01420 at 320.157 kb on + strand, within QEN71_RS01420 at 320.157 kb on + strand, within QEN71_RS01420 at 320.158 kb on - strand, within QEN71_RS01420 at 320.158 kb on - strand, within QEN71_RS01420 at 320.158 kb on - strand, within QEN71_RS01420 at 320.271 kb on + strand at 320.321 kb on + strand at 320.381 kb on + strand, within QEN71_RS01425 at 320.568 kb on + strand at 320.568 kb on + strand at 320.568 kb on + strand at 320.568 kb on + strand at 320.569 kb on - strand at 320.569 kb on - strand at 320.569 kb on - strand at 320.659 kb on + strand at 320.659 kb on + strand at 320.660 kb on - strand at 320.660 kb on - strand at 320.660 kb on - strand at 320.660 kb on - strand at 320.660 kb on - strand at 320.660 kb on - strand at 320.660 kb on - strand at 320.660 kb on - strand at 320.705 kb on + strand at 320.705 kb on + strand at 320.705 kb on + strand at 320.705 kb on + strand at 320.706 kb on - strand at 320.706 kb on - strand at 320.719 kb on + strand at 320.719 kb on + strand at 320.719 kb on + strand at 320.719 kb on + strand at 320.719 kb on + strand at 320.719 kb on + strand at 320.719 kb on + strand at 320.719 kb on + strand at 320.719 kb on + strand at 320.720 kb on - strand at 320.720 kb on - strand at 320.720 kb on - strand at 320.720 kb on - strand at 320.720 kb on - strand at 320.720 kb on - strand at 320.720 kb on - strand at 320.720 kb on - strand at 320.720 kb on - strand at 320.721 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.776 kb on + strand at 320.777 kb on - strand at 320.777 kb on - strand at 320.777 kb on - strand at 320.777 kb on - strand at 320.847 kb on + strand at 320.847 kb on + strand at 320.848 kb on - strand at 320.884 kb on - strand at 320.884 kb on - strand at 321.091 kb on - strand, within QEN71_RS01430 at 321.162 kb on + strand, within QEN71_RS01430 at 321.163 kb on - strand, within QEN71_RS01430 at 321.163 kb on - strand, within QEN71_RS01430 at 321.176 kb on + strand, within QEN71_RS01430 at 321.176 kb on + strand, within QEN71_RS01430 at 321.177 kb on - strand, within QEN71_RS01430 at 321.522 kb on + strand, within QEN71_RS01430 at 321.523 kb on - strand, within QEN71_RS01430 at 321.523 kb on - strand, within QEN71_RS01430
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 319,429 + -1.2 319,429 + -0.1 319,429 + -0.3 319,429 + -1.5 319,429 + -0.1 319,430 - -1.1 319,430 - -1.1 319,541 + -1.7 319,541 + -0.2 319,541 + -0.1 319,541 + -0.5 319,541 + +0.9 319,541 + -0.8 319,541 + -0.5 319,541 + -2.1 319,541 + -1.0 319,541 + +0.9 319,541 + -1.9 319,541 + -1.4 319,541 + -1.0 319,541 + -0.7 319,542 - +0.2 319,542 - -0.2 319,542 - -1.0 319,542 - -0.7 319,542 - +1.1 319,542 - +0.9 319,542 - +0.8 319,542 - -0.6 319,542 - +0.6 319,542 - +0.6 319,542 - -0.2 319,542 - +0.0 319,542 - -0.7 319,542 - +0.7 319,542 - -0.1 319,542 - +0.3 319,542 - -0.4 319,542 - +0.5 319,569 + +2.4 319,569 + -0.5 319,570 - -3.8 319,678 + +0.6 319,678 + +0.0 319,678 + -0.7 319,678 + -0.6 319,679 - -4.2 319,679 - -3.0 319,679 - -3.2 319,679 - -3.8 319,679 - -5.1 319,795 - QEN71_RS01420 0.13 -3.4 319,795 - QEN71_RS01420 0.13 -1.1 319,795 - QEN71_RS01420 0.13 -6.4 319,799 - QEN71_RS01420 0.14 -3.5 320,036 - QEN71_RS01420 0.60 -4.6 320,157 + QEN71_RS01420 0.83 -2.1 320,157 + QEN71_RS01420 0.83 -1.8 320,157 + QEN71_RS01420 0.83 -1.0 320,157 + QEN71_RS01420 0.83 -1.6 320,157 + QEN71_RS01420 0.83 -1.6 320,157 + QEN71_RS01420 0.83 -1.1 320,157 + QEN71_RS01420 0.83 -0.3 320,157 + QEN71_RS01420 0.83 -1.3 320,158 - QEN71_RS01420 0.84 -0.6 320,158 - QEN71_RS01420 0.84 -0.9 320,158 - QEN71_RS01420 0.84 -1.0 320,271 + -1.0 320,321 + -0.1 320,381 + QEN71_RS01425 0.30 +0.3 320,568 + -0.9 320,568 + -1.4 320,568 + -0.8 320,568 + -0.9 320,569 - +0.1 320,569 - +0.8 320,569 - -0.2 320,659 + -2.6 320,659 + -2.2 320,660 - +0.5 320,660 - +0.7 320,660 - -0.1 320,660 - +0.9 320,660 - +0.7 320,660 - +1.0 320,660 - +0.4 320,660 - -1.3 320,705 + -2.0 320,705 + -0.7 320,705 + -0.8 320,705 + -1.3 320,706 - +0.9 320,706 - +0.1 320,719 + -3.5 320,719 + -2.8 320,719 + -2.5 320,719 + -3.3 320,719 + -2.3 320,719 + -3.2 320,719 + -2.7 320,719 + -2.0 320,719 + -2.0 320,720 - -1.1 320,720 - -3.0 320,720 - -1.3 320,720 - -2.4 320,720 - +0.8 320,720 - -1.6 320,720 - -1.3 320,720 - -2.1 320,720 - -1.3 320,721 + -3.4 320,776 + -1.4 320,776 + -0.4 320,776 + -1.7 320,776 + -0.9 320,776 + -1.2 320,776 + -1.4 320,776 + -1.8 320,776 + -0.9 320,776 + -1.7 320,776 + -1.8 320,776 + -1.4 320,776 + -1.0 320,776 + -2.0 320,776 + -1.4 320,776 + -2.4 320,777 - +1.9 320,777 - +0.2 320,777 - -1.3 320,777 - +0.7 320,847 + -1.3 320,847 + +1.9 320,848 - -0.7 320,884 - +1.4 320,884 - -0.7 321,091 - QEN71_RS01430 0.17 +1.6 321,162 + QEN71_RS01430 0.21 -0.1 321,163 - QEN71_RS01430 0.21 +0.5 321,163 - QEN71_RS01430 0.21 -0.1 321,176 + QEN71_RS01430 0.22 +1.5 321,176 + QEN71_RS01430 0.22 -0.1 321,177 - QEN71_RS01430 0.22 +0.9 321,522 + QEN71_RS01430 0.42 -1.0 321,523 - QEN71_RS01430 0.42 +1.4 321,523 - QEN71_RS01430 0.42 +1.9
Or see this region's nucleotide sequence