Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04076

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
4,572,677	+				+0.5
4,572,685	-				+1.9
4,572,698	+				-2.6
4,572,698	+				+1.2
4,572,698	+				-0.9
4,572,698	+				-2.8
4,572,698	+				+0.6
4,572,698	+				-0.4
4,572,706	-				+0.9
4,572,706	-				+0.0
4,572,798	-				-0.9
4,572,812	+				+0.6
4,572,887	+				-1.0
4,572,888	+				-0.6
4,572,888	+				+0.5
4,572,889	+				-2.0
4,572,889	+				+0.2
4,572,889	+				+1.4
4,572,895	-		MIT1002_04074	0.11	+0.7
4,572,897	-		MIT1002_04074	0.11	+0.1
4,572,897	-		MIT1002_04074	0.11	+0.6
4,572,897	-		MIT1002_04074	0.11	-1.8
4,572,897	-		MIT1002_04074	0.11	-3.0
4,572,897	-		MIT1002_04074	0.11	+0.3
4,572,897	-		MIT1002_04074	0.11	-1.7
4,572,920	-		MIT1002_04074	0.14	-3.4
4,572,921	-		MIT1002_04074	0.15	-2.9
4,572,946	+		MIT1002_04074	0.19	-0.0
4,572,951	+		MIT1002_04074	0.19	-0.1
4,572,953	-		MIT1002_04074	0.20	-2.9
4,572,953	-		MIT1002_04074	0.20	+0.3
4,572,953	-		MIT1002_04074	0.20	-0.7
4,572,955	-		MIT1002_04074	0.20	+0.3
4,572,955	-		MIT1002_04074	0.20	-0.9
4,572,955	-		MIT1002_04074	0.20	-0.9
4,572,955	-		MIT1002_04074	0.20	+0.7
4,572,955	-		MIT1002_04074	0.20	+0.2
4,572,955	-		MIT1002_04074	0.20	+0.7
4,572,955	-		MIT1002_04074	0.20	+2.0
4,572,977	-		MIT1002_04074	0.23	-2.7
4,573,015	+		MIT1002_04074	0.29	-2.1
4,573,052	-		MIT1002_04074	0.35	-1.1
4,573,062	-		MIT1002_04074	0.37	-0.7
4,573,067	-		MIT1002_04074	0.38	+0.2
4,573,075	-		MIT1002_04074	0.39	-0.5
4,573,075	-		MIT1002_04074	0.39	+0.8
4,573,083	+		MIT1002_04074	0.40	-0.5
4,573,083	+		MIT1002_04074	0.40	-0.5
4,573,090	+		MIT1002_04074	0.41	+1.6
4,573,168	+		MIT1002_04074	0.53	+0.2
4,573,178	+		MIT1002_04074	0.55	+1.2
4,573,186	-		MIT1002_04074	0.56	+0.0
4,573,196	+		MIT1002_04074	0.58	-0.4
4,573,196	+		MIT1002_04074	0.58	-1.7
4,573,196	+		MIT1002_04074	0.58	-0.1
4,573,197	-		MIT1002_04074	0.58	-2.1
4,573,201	+		MIT1002_04074	0.59	-2.8
4,573,204	-		MIT1002_04074	0.59	-0.1
4,573,204	-		MIT1002_04074	0.59	-1.1
4,573,204	-		MIT1002_04074	0.59	-1.2
4,573,204	-		MIT1002_04074	0.59	+0.8
4,573,204	-		MIT1002_04074	0.59	+1.3
4,573,204	-		MIT1002_04074	0.59	+0.5
4,573,204	-		MIT1002_04074	0.59	+1.2
4,573,241	-		MIT1002_04074	0.65	-0.6
4,573,246	-		MIT1002_04074	0.66	+0.6
4,573,259	-		MIT1002_04074	0.68	-1.1
4,573,267	-		MIT1002_04074	0.69	+0.2
4,573,267	-		MIT1002_04074	0.69	-0.5
4,573,272	-		MIT1002_04074	0.70	+1.6
4,573,273	+		MIT1002_04074	0.70	+0.5
4,573,273	+		MIT1002_04074	0.70	-1.0
4,573,273	+		MIT1002_04074	0.70	+0.7
4,573,281	-		MIT1002_04074	0.71	+1.1
4,573,281	-		MIT1002_04074	0.71	+0.8
4,573,315	-		MIT1002_04074	0.77	+0.3
4,573,327	-		MIT1002_04074	0.78	-0.9
4,573,328	-		MIT1002_04074	0.79	-0.5
4,573,328	-		MIT1002_04074	0.79	+0.5
4,573,329	-		MIT1002_04074	0.79	-2.7
4,573,347	-		MIT1002_04074	0.82	-1.5
4,573,347	-		MIT1002_04074	0.82	-0.8
4,573,349	+		MIT1002_04074	0.82	-0.2
4,573,349	+		MIT1002_04074	0.82	+0.4
4,573,351	+		MIT1002_04074	0.82	+0.3
4,573,357	-		MIT1002_04074	0.83	-1.6
4,573,357	-		MIT1002_04074	0.83	-1.3
4,573,362	+		MIT1002_04074	0.84	+1.1
4,573,367	+		MIT1002_04074	0.85	+0.7
4,573,367	+		MIT1002_04074	0.85	+0.6
4,573,370	-		MIT1002_04074	0.85	+0.6
4,573,377	+		MIT1002_04074	0.86	+0.2
4,573,382	+		MIT1002_04074	0.87	+1.7
4,573,430	+				-0.4
4,573,457	+				-0.3
4,573,457	+				+0.4
4,573,457	+				+0.8
4,573,508	+		MIT1002_04075	0.28	-0.6
4,573,508	+		MIT1002_04075	0.28	-1.4
4,573,516	-		MIT1002_04075	0.31	-0.6
4,573,517	-		MIT1002_04075	0.32	+0.4
4,573,527	-		MIT1002_04075	0.36	+2.5
4,573,527	-		MIT1002_04075	0.36	-0.4
4,573,546	+		MIT1002_04075	0.43	-0.2
4,573,585	+		MIT1002_04075	0.59	+0.6
4,573,715	-		MIT1002_04076	0.15	-0.4
4,573,730	+		MIT1002_04076	0.20	+1.3
4,573,730	+		MIT1002_04076	0.20	+2.5
4,573,766	+		MIT1002_04076	0.34	+0.5
4,573,766	+		MIT1002_04076	0.34	-0.5
4,573,766	+		MIT1002_04076	0.34	-1.0
4,573,767	-		MIT1002_04076	0.34	+2.5
4,573,774	-		MIT1002_04076	0.37	+1.1
4,573,774	-		MIT1002_04076	0.37	-0.2
4,573,774	-		MIT1002_04076	0.37	+0.3
4,573,822	+		MIT1002_04076	0.56	-1.1
4,573,823	-		MIT1002_04076	0.56	-0.4
4,573,827	+		MIT1002_04076	0.57	-0.3
4,573,828	-		MIT1002_04076	0.58	-0.0
4,573,830	-		MIT1002_04076	0.59	+1.5
4,573,830	-		MIT1002_04076	0.59	+0.5
4,573,835	-		MIT1002_04076	0.61	+1.3
4,573,835	-		MIT1002_04076	0.61	-2.4
4,573,835	-		MIT1002_04076	0.61	-2.5
4,573,835	-		MIT1002_04076	0.61	+1.1
4,573,840	-		MIT1002_04076	0.62	-2.0
4,573,841	+		MIT1002_04076	0.63	-2.2
4,573,841	+		MIT1002_04076	0.63	+1.9
4,573,841	+		MIT1002_04076	0.63	+0.8
4,573,841	+		MIT1002_04076	0.63	-0.3
4,573,866	+		MIT1002_04076	0.72	+1.3
4,573,874	-		MIT1002_04076	0.75	+0.1
4,574,108	+				-0.6
4,574,110	-		MIT1002_04077	0.10	-0.8
4,574,113	+		MIT1002_04077	0.10	+2.1
4,574,113	+		MIT1002_04077	0.10	-0.0
4,574,113	+		MIT1002_04077	0.10	+0.0
4,574,113	+		MIT1002_04077	0.10	+0.7
4,574,113	+		MIT1002_04077	0.10	-2.8
4,574,113	+		MIT1002_04077	0.10	+0.1
4,574,113	+		MIT1002_04077	0.10	+0.5
4,574,113	+		MIT1002_04077	0.10	-0.4
4,574,121	-		MIT1002_04077	0.11	-0.4
4,574,121	-		MIT1002_04077	0.11	-0.4
4,574,121	-		MIT1002_04077	0.11	+1.1
4,574,121	-		MIT1002_04077	0.11	+0.7
4,574,149	-		MIT1002_04077	0.12	-3.9
4,574,212	+		MIT1002_04077	0.16	+1.0
4,574,272	-		MIT1002_04077	0.19	+0.7
4,574,330	-		MIT1002_04077	0.23	-2.8
4,574,381	-		MIT1002_04077	0.26	+0.6
4,574,469	+		MIT1002_04077	0.31	+0.7
4,574,469	+		MIT1002_04077	0.31	-1.1
4,574,501	-		MIT1002_04077	0.33	+1.3
4,574,501	-		MIT1002_04077	0.33	+0.4
4,574,552	-		MIT1002_04077	0.36	-0.5
4,574,554	-		MIT1002_04077	0.36	+0.4
4,574,653	-		MIT1002_04077	0.42	+0.5
4,574,654	-		MIT1002_04077	0.42	-0.5
4,574,665	+		MIT1002_04077	0.42	+0.2
4,574,665	+		MIT1002_04077	0.42	+2.3
4,574,671	-		MIT1002_04077	0.43	+0.6
4,574,724	-		MIT1002_04077	0.46	-3.5
4,574,724	-		MIT1002_04077	0.46	+0.6
4,574,726	-		MIT1002_04077	0.46	-1.3
4,574,749	-		MIT1002_04077	0.47	-1.1
4,574,749	-		MIT1002_04077	0.47	+0.0
4,574,754	-		MIT1002_04077	0.47	+0.4
4,574,760	+		MIT1002_04077	0.48	+0.1
4,574,760	+		MIT1002_04077	0.48	+0.9
4,574,768	-		MIT1002_04077	0.48	-0.2
4,574,785	+		MIT1002_04077	0.49	+0.1
4,574,785	+		MIT1002_04077	0.49	+0.8
4,574,793	-		MIT1002_04077	0.50	-0.0
4,574,880	+		MIT1002_04077	0.55	-0.6
4,574,880	+		MIT1002_04077	0.55	+1.2
4,574,888	-		MIT1002_04077	0.55	-0.6
4,574,936	-		MIT1002_04077	0.58	+1.2