Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03780

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
4,224,089	+		MIT1002_03779	0.40	+0.4
4,224,206	-		MIT1002_03779	0.48	-2.6
4,224,248	+		MIT1002_03779	0.51	-1.4
4,224,248	+		MIT1002_03779	0.51	+1.0
4,224,248	+		MIT1002_03779	0.51	+0.7
4,224,268	-		MIT1002_03779	0.53	+1.7
4,224,275	+		MIT1002_03779	0.53	+1.3
4,224,275	+		MIT1002_03779	0.53	-0.3
4,224,283	-		MIT1002_03779	0.54	-2.8
4,224,283	-		MIT1002_03779	0.54	+0.6
4,224,300	-		MIT1002_03779	0.55	-1.6
4,224,305	-		MIT1002_03779	0.55	-0.1
4,224,324	+		MIT1002_03779	0.57	+0.6
4,224,351	-		MIT1002_03779	0.58	+0.8
4,224,372	-		MIT1002_03779	0.60	+1.6
4,224,420	-		MIT1002_03779	0.63	+0.9
4,224,426	+		MIT1002_03779	0.64	-2.8
4,224,426	+		MIT1002_03779	0.64	+1.9
4,224,434	-		MIT1002_03779	0.64	-2.6
4,224,509	+		MIT1002_03779	0.70	+0.3
4,224,509	+		MIT1002_03779	0.70	+1.6
4,224,514	+		MIT1002_03779	0.70	-0.3
4,224,552	-		MIT1002_03779	0.73	-3.2
4,224,552	-		MIT1002_03779	0.73	-0.1
4,224,552	-		MIT1002_03779	0.73	-1.0
4,224,585	+		MIT1002_03779	0.75	-1.3
4,224,674	+		MIT1002_03779	0.81	-1.0
4,224,682	-		MIT1002_03779	0.82	+0.8
4,224,720	+		MIT1002_03779	0.84	-1.0
4,224,732	+		MIT1002_03779	0.85	+1.2
4,224,732	+		MIT1002_03779	0.85	+0.2
4,224,811	-				-3.1
4,224,840	-				+0.3
4,224,874	-				+1.0
4,224,894	+				+0.6
4,225,122	+				+1.6
4,225,122	+				+0.2
4,225,122	+				+1.2
4,225,127	+				-0.7
4,225,130	-				-3.1
4,225,130	-				+0.5
4,225,130	-				-0.9
4,225,130	-				-2.8
4,225,130	-				-1.5
4,225,185	-		MIT1002_03780	0.13	-1.2
4,225,269	+		MIT1002_03780	0.18	-1.2
4,225,348	+		MIT1002_03780	0.23	-0.5
4,225,348	+		MIT1002_03780	0.23	+0.8
4,225,361	-		MIT1002_03780	0.23	+0.6
4,225,413	-		MIT1002_03780	0.27	-0.6
4,225,443	-		MIT1002_03780	0.28	+0.7
4,225,588	+		MIT1002_03780	0.37	+0.1
4,225,588	+		MIT1002_03780	0.37	+0.8
4,225,596	-		MIT1002_03780	0.38	-0.6
4,225,596	-		MIT1002_03780	0.38	+0.3
4,225,596	-		MIT1002_03780	0.38	+0.3
4,225,596	-		MIT1002_03780	0.38	+0.4
4,225,596	-		MIT1002_03780	0.38	-1.1
4,225,604	+		MIT1002_03780	0.38	+0.2
4,225,604	+		MIT1002_03780	0.38	+1.3
4,225,635	-		MIT1002_03780	0.40	+1.0
4,225,637	+		MIT1002_03780	0.40	+1.2
4,225,637	+		MIT1002_03780	0.40	+0.4
4,225,645	-		MIT1002_03780	0.41	-1.8
4,225,645	-		MIT1002_03780	0.41	-0.4
4,225,703	-		MIT1002_03780	0.44	-0.5
4,225,837	+		MIT1002_03780	0.52	+0.1
4,225,837	+		MIT1002_03780	0.52	-0.0
4,225,837	+		MIT1002_03780	0.52	-0.1
4,225,837	+		MIT1002_03780	0.52	+1.2
4,225,837	+		MIT1002_03780	0.52	+1.5
4,225,837	+		MIT1002_03780	0.52	-0.5
4,225,837	+		MIT1002_03780	0.52	-0.8
4,225,837	+		MIT1002_03780	0.52	-3.2
4,225,837	+		MIT1002_03780	0.52	+0.2
4,225,837	+		MIT1002_03780	0.52	-2.8
4,225,837	+		MIT1002_03780	0.52	-3.8
4,225,837	+		MIT1002_03780	0.52	+0.6
4,225,837	+		MIT1002_03780	0.52	+0.5
4,225,845	-		MIT1002_03780	0.53	-2.3
4,225,845	-		MIT1002_03780	0.53	+0.6
4,225,845	-		MIT1002_03780	0.53	-3.2
4,225,845	-		MIT1002_03780	0.53	-0.4
4,225,845	-		MIT1002_03780	0.53	-2.2
4,225,845	-		MIT1002_03780	0.53	-2.5
4,225,845	-		MIT1002_03780	0.53	+1.2
4,225,845	-		MIT1002_03780	0.53	-0.4
4,225,860	+		MIT1002_03780	0.54	+1.2
4,225,860	+		MIT1002_03780	0.54	-0.1
4,225,864	-		MIT1002_03780	0.54	-4.0
4,225,868	-		MIT1002_03780	0.54	+1.1
4,225,870	+		MIT1002_03780	0.54	-1.6
4,225,878	-		MIT1002_03780	0.55	-2.7
4,225,878	-		MIT1002_03780	0.55	-0.5
4,225,887	-		MIT1002_03780	0.55	-2.2
4,226,042	-		MIT1002_03780	0.65	+0.5
4,226,052	-		MIT1002_03780	0.66	+0.8
4,226,084	-		MIT1002_03780	0.67	+0.9
4,226,098	-		MIT1002_03780	0.68	-2.6
4,226,120	+		MIT1002_03780	0.70	+0.1
4,226,120	+		MIT1002_03780	0.70	+0.5
4,226,128	-		MIT1002_03780	0.70	-1.4
4,226,128	-		MIT1002_03780	0.70	-1.0
4,226,128	-		MIT1002_03780	0.70	-2.9
4,226,128	-		MIT1002_03780	0.70	-0.0
4,226,174	+		MIT1002_03780	0.73	+0.2
4,226,214	-		MIT1002_03780	0.75	-0.2
4,226,216	-		MIT1002_03780	0.76	-2.5
4,226,237	-		MIT1002_03780	0.77	-0.4
4,226,272	-		MIT1002_03780	0.79	+0.2
4,226,295	-		MIT1002_03780	0.80	-2.3
4,226,307	+		MIT1002_03780	0.81	-1.9
4,226,328	-		MIT1002_03780	0.82	-0.9
4,226,347	+		MIT1002_03780	0.83	-4.1
4,226,350	-		MIT1002_03780	0.84	+1.0
4,226,428	-		MIT1002_03780	0.88	+0.3
4,226,497	+				+0.9
4,226,505	-				+0.5
4,226,566	+				-2.8
4,226,575	-				+0.3
4,226,676	+				-1.3
4,226,693	+				-1.2
4,226,693	+				-0.4
4,226,701	-				+0.3
4,226,701	-				-0.3
4,226,854	+				-0.6
4,226,854	+				-0.9
4,226,854	+				-0.8
4,226,861	+		MIT1002_03781	0.10	-0.2
4,226,861	+		MIT1002_03781	0.10	-1.0
4,226,862	-		MIT1002_03781	0.11	-0.7
4,226,864	-		MIT1002_03781	0.11	+1.0
4,226,988	-		MIT1002_03781	0.25	-5.4
4,226,988	-		MIT1002_03781	0.25	+0.8
4,227,096	-		MIT1002_03781	0.37	-0.9
4,227,096	-		MIT1002_03781	0.37	+0.4
4,227,231	+		MIT1002_03781	0.52	+0.4
4,227,246	-		MIT1002_03781	0.54	+0.3
4,227,306	-		MIT1002_03781	0.61	+0.1
4,227,306	-		MIT1002_03781	0.61	-0.0
4,227,355	+		MIT1002_03781	0.66	+0.4
4,227,362	+		MIT1002_03781	0.67	-1.4
4,227,362	+		MIT1002_03781	0.67	-3.9
4,227,370	-		MIT1002_03781	0.68	-0.6
4,227,375	-		MIT1002_03781	0.68	+0.4
4,227,380	-		MIT1002_03781	0.69	-0.2
4,227,507	+		MIT1002_03781	0.83	+2.1
4,227,616	+				-0.1