Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03488

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
3,893,024	+		MIT1002_03487	0.20	-2.7
3,893,108	-		MIT1002_03487	0.27	-0.7
3,893,248	-		MIT1002_03487	0.38	-2.1
3,893,370	+		MIT1002_03487	0.48	-1.2
3,893,380	-		MIT1002_03487	0.49	-1.0
3,893,411	+		MIT1002_03487	0.52	-0.4
3,893,424	-		MIT1002_03487	0.53	-0.9
3,893,503	+		MIT1002_03487	0.60	-0.7
3,893,565	+		MIT1002_03487	0.65	-1.6
3,893,724	-		MIT1002_03487	0.78	-2.0
3,893,766	+		MIT1002_03487	0.81	-0.7
3,893,826	+		MIT1002_03487	0.86	-2.4
3,893,999	-				-2.5
3,894,097	+				-1.2
3,894,189	-		MIT1002_03488	0.14	-3.3
3,894,307	-		MIT1002_03488	0.23	-2.2
3,894,307	-		MIT1002_03488	0.23	+2.2
3,894,359	-		MIT1002_03488	0.27	-3.1
3,894,482	+		MIT1002_03488	0.35	-1.7
3,894,677	-		MIT1002_03488	0.50	-2.5
3,894,770	-		MIT1002_03488	0.56	-2.2
3,894,950	+		MIT1002_03488	0.69	-2.0
3,895,105	-		MIT1002_03488	0.81	+2.0
3,895,195	-		MIT1002_03488	0.87	-2.9
3,895,386	-				-0.7
3,895,419	-				+0.3
3,895,524	-				+0.1
3,895,524	-				+1.7
3,895,597	-				-1.3
3,895,599	+				-1.9
3,895,653	-				-2.9
3,895,753	-				+1.8
3,895,755	+				-1.0