Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03431

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
3,832,974	-		MIT1002_03430	0.38	-1.0
3,833,015	-		MIT1002_03430	0.42	-1.0
3,833,048	+		MIT1002_03430	0.44	-3.6
3,833,075	-		MIT1002_03430	0.47	-0.6
3,833,115	+		MIT1002_03430	0.50	+1.6
3,833,201	-		MIT1002_03430	0.58	+0.9
3,833,232	+		MIT1002_03430	0.61	-3.1
3,833,253	-		MIT1002_03430	0.63	-0.4
3,833,395	+		MIT1002_03430	0.75	-0.6
3,833,437	+		MIT1002_03430	0.79	-3.6
3,833,447	-		MIT1002_03430	0.80	+0.9
3,833,499	+		MIT1002_03430	0.85	+0.3
3,833,514	-		MIT1002_03430	0.86	-1.0
3,833,575	+				+0.7
3,833,575	+				+0.5
3,833,575	+				-1.2
3,833,591	-				-1.2
3,833,591	-				-1.0
3,833,643	+				-0.5
3,833,643	+				+0.3
3,833,646	-				+0.2
3,833,646	-				-0.1
3,833,646	-				+1.2
3,833,651	-				-1.4
3,833,651	-				-1.7
3,833,694	+				+0.1
3,833,746	+				-0.2
3,833,770	+				-0.5
3,833,770	+				+1.1
3,833,798	-				-0.1
3,833,813	-				+0.3
3,833,834	-				+0.9
3,834,110	+				-0.8
3,834,126	+				-0.7
3,834,135	+		MIT1002_03431	0.10	-1.6
3,834,143	-		MIT1002_03431	0.11	-0.4
3,834,205	-		MIT1002_03431	0.14	-1.5
3,834,245	-		MIT1002_03431	0.16	-0.5
3,834,249	+		MIT1002_03431	0.16	+0.5
3,834,295	-		MIT1002_03431	0.19	-0.6
3,834,333	+		MIT1002_03431	0.21	+1.0
3,834,403	+		MIT1002_03431	0.25	+0.2
3,834,455	+		MIT1002_03431	0.27	-0.1
3,834,455	+		MIT1002_03431	0.27	-0.4
3,834,455	+		MIT1002_03431	0.27	+0.6
3,834,463	-		MIT1002_03431	0.28	+1.1
3,834,463	-		MIT1002_03431	0.28	-0.2
3,834,463	-		MIT1002_03431	0.28	+1.3
3,834,463	-		MIT1002_03431	0.28	+0.2
3,834,463	-		MIT1002_03431	0.28	-0.9
3,834,463	-		MIT1002_03431	0.28	+1.3
3,834,463	-		MIT1002_03431	0.28	-1.0
3,834,477	+		MIT1002_03431	0.29	-0.4
3,834,485	-		MIT1002_03431	0.29	-0.9
3,834,507	+		MIT1002_03431	0.30	+0.5
3,834,510	-		MIT1002_03431	0.30	+0.2
3,834,512	+		MIT1002_03431	0.31	-2.7
3,834,512	+		MIT1002_03431	0.31	+0.2
3,834,515	-		MIT1002_03431	0.31	-0.7
3,834,517	+		MIT1002_03431	0.31	-2.9
3,834,525	-		MIT1002_03431	0.31	-1.8
3,834,533	-		MIT1002_03431	0.32	-0.2
3,834,594	+		MIT1002_03431	0.35	+0.9
3,834,594	+		MIT1002_03431	0.35	-0.2
3,834,602	-		MIT1002_03431	0.35	+1.9
3,834,604	+		MIT1002_03431	0.35	-1.8
3,834,604	+		MIT1002_03431	0.35	+2.0
3,834,624	-		MIT1002_03431	0.37	-0.4
3,834,678	-		MIT1002_03431	0.39	-1.1
3,834,706	+		MIT1002_03431	0.41	-0.9
3,834,859	-		MIT1002_03431	0.49	+1.9
3,834,992	+		MIT1002_03431	0.56	-1.7
3,835,062	+		MIT1002_03431	0.60	+0.7
3,835,147	+		MIT1002_03431	0.65	-1.9
3,835,176	-		MIT1002_03431	0.66	+0.9
3,835,192	+		MIT1002_03431	0.67	+0.2
3,835,200	-		MIT1002_03431	0.67	-0.0
3,835,207	+		MIT1002_03431	0.68	-1.2
3,835,218	+		MIT1002_03431	0.68	+0.9
3,835,218	+		MIT1002_03431	0.68	-1.8
3,835,226	-		MIT1002_03431	0.69	+2.4
3,835,226	-		MIT1002_03431	0.69	-0.0
3,835,296	+		MIT1002_03431	0.73	-0.7
3,835,296	+		MIT1002_03431	0.73	-1.7
3,835,296	-		MIT1002_03431	0.73	-1.4
3,835,304	-		MIT1002_03431	0.73	+0.2
3,835,304	-		MIT1002_03431	0.73	+0.1
3,835,304	-		MIT1002_03431	0.73	-1.8
3,835,304	-		MIT1002_03431	0.73	+0.1
3,835,457	+		MIT1002_03431	0.81	-0.7
3,835,470	-		MIT1002_03431	0.82	-0.3
3,835,473	-		MIT1002_03431	0.82	-0.3
3,835,490	-		MIT1002_03431	0.83	-0.1
3,835,490	-		MIT1002_03431	0.83	+0.9
3,835,515	+		MIT1002_03431	0.84	-0.1
3,835,593	-		MIT1002_03431	0.88	-0.5
3,835,624	-				+0.5
3,835,747	+				+0.6
3,835,755	-				-1.8
3,835,762	-				-0.3
3,835,768	+				+1.6
3,835,807	+				+0.2
3,836,355	+				+1.2
3,836,393	+				-2.0
3,836,402	-				-1.1
3,836,436	+				-0.2
3,836,456	-				+1.9
3,836,514	-		MIT1002_03433	0.16	-0.7
3,836,603	+		MIT1002_03433	0.28	+0.4
3,836,603	+		MIT1002_03433	0.28	-1.3
3,836,661	+		MIT1002_03433	0.35	+1.4
3,836,669	+		MIT1002_03433	0.36	-1.8
3,836,669	+		MIT1002_03433	0.36	+0.2
3,836,669	+		MIT1002_03433	0.36	-1.7
3,836,669	+		MIT1002_03433	0.36	-0.4
3,836,669	+		MIT1002_03433	0.36	-0.3
3,836,671	+		MIT1002_03433	0.36	-1.1
3,836,677	-		MIT1002_03433	0.37	-0.1
3,836,677	-		MIT1002_03433	0.37	-1.7
3,836,677	-		MIT1002_03433	0.37	-0.8
3,836,679	-		MIT1002_03433	0.37	-0.5
3,836,679	-		MIT1002_03433	0.37	-2.7
3,836,731	-		MIT1002_03433	0.44	-0.4
3,836,755	+		MIT1002_03433	0.47	+0.1
3,836,784	-		MIT1002_03433	0.51	+1.3
3,836,807	+		MIT1002_03433	0.53	+1.8