Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03421

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
3,823,074	-				-0.9
3,823,091	-				+0.5
3,823,114	+				+0.1
3,823,141	+				-4.3
3,823,153	+				-1.0
3,823,161	-				+0.3
3,823,548	-		MIT1002_03420	0.43	-0.0
3,823,694	+		MIT1002_03420	0.59	-2.0
3,823,720	+		MIT1002_03420	0.62	-1.1
3,823,756	+		MIT1002_03420	0.66	-0.4
3,823,756	+		MIT1002_03420	0.66	-2.2
3,823,764	-		MIT1002_03420	0.67	+0.6
3,823,837	+		MIT1002_03420	0.75	+1.3
3,823,837	+		MIT1002_03420	0.75	+0.0
3,823,837	+		MIT1002_03420	0.75	-1.8
3,823,837	+		MIT1002_03420	0.75	-1.2
3,823,845	-		MIT1002_03420	0.76	+0.0
3,823,872	+		MIT1002_03420	0.79	+0.2
3,823,872	+		MIT1002_03420	0.79	+1.8
3,823,880	-		MIT1002_03420	0.80	+0.2
3,823,882	-		MIT1002_03420	0.80	+0.5
3,824,056	-				+0.8
3,824,074	+				+0.5
3,824,082	-				+0.7
3,824,138	-				+1.6
3,824,138	-				-1.2
3,824,205	+		MIT1002_03421	0.16	-1.7
3,824,220	-		MIT1002_03421	0.18	-1.6
3,824,222	+		MIT1002_03421	0.18	+0.2
3,824,222	+		MIT1002_03421	0.18	-0.0
3,824,222	+		MIT1002_03421	0.18	+0.1
3,824,222	+		MIT1002_03421	0.18	-1.2
3,824,244	+		MIT1002_03421	0.20	+1.2
3,824,244	+		MIT1002_03421	0.20	-1.6
3,824,252	-		MIT1002_03421	0.21	-2.0
3,824,252	-		MIT1002_03421	0.21	-1.7
3,824,257	-		MIT1002_03421	0.22	-2.4
3,824,257	-		MIT1002_03421	0.22	-2.3
3,824,262	-		MIT1002_03421	0.22	-0.1
3,824,291	+		MIT1002_03421	0.26	-0.2
3,824,299	-		MIT1002_03421	0.27	-1.1
3,824,360	+		MIT1002_03421	0.33	-0.2
3,824,460	-		MIT1002_03421	0.45	-0.0
3,824,460	-		MIT1002_03421	0.45	+1.0
3,824,487	+		MIT1002_03421	0.48	+0.3
3,824,568	+		MIT1002_03421	0.57	-0.4
3,824,568	+		MIT1002_03421	0.57	-0.3
3,824,568	+		MIT1002_03421	0.57	+0.5
3,824,568	+		MIT1002_03421	0.57	+0.4
3,824,575	+		MIT1002_03421	0.57	-0.7
3,824,598	-		MIT1002_03421	0.60	-0.3
3,824,678	-		MIT1002_03421	0.69	-1.3
3,824,860	-		MIT1002_03421	0.89	+0.4
3,824,906	+				+0.1
3,824,906	+				-0.4
3,824,969	+				-1.2
3,825,029	+				+1.3
3,825,042	+				+0.5
3,825,042	+				-1.5
3,825,042	+				-0.4
3,825,050	-				-3.6
3,825,050	-				+0.2
3,825,087	+				+2.3
3,825,146	-		MIT1002_03422	0.14	+0.4
3,825,167	+		MIT1002_03422	0.16	-1.7
3,825,175	-		MIT1002_03422	0.16	-0.8
3,825,217	-		MIT1002_03422	0.19	-0.5
3,825,277	+		MIT1002_03422	0.24	-0.5
3,825,277	+		MIT1002_03422	0.24	-1.1
3,825,285	-		MIT1002_03422	0.24	+0.1
3,825,292	+		MIT1002_03422	0.25	-0.4
3,825,297	+		MIT1002_03422	0.25	-3.2
3,825,300	-		MIT1002_03422	0.25	+0.1
3,825,302	-		MIT1002_03422	0.26	+1.5
3,825,344	-		MIT1002_03422	0.29	+0.4
3,825,365	+		MIT1002_03422	0.30	-2.8
3,825,450	-		MIT1002_03422	0.37	-0.2
3,825,458	-		MIT1002_03422	0.37	-0.3
3,825,493	+		MIT1002_03422	0.40	-0.4
3,825,549	-		MIT1002_03422	0.44	+1.6
3,825,644	+		MIT1002_03422	0.51	+2.2
3,825,649	+		MIT1002_03422	0.52	+2.0
3,825,652	-		MIT1002_03422	0.52	+0.9
3,825,668	-		MIT1002_03422	0.53	+1.4
3,825,712	-		MIT1002_03422	0.56	+0.3
3,825,719	-		MIT1002_03422	0.57	-0.7
3,825,743	+		MIT1002_03422	0.59	+0.3
3,825,751	-		MIT1002_03422	0.59	-1.7
3,825,753	-		MIT1002_03422	0.59	-3.5
3,825,753	-		MIT1002_03422	0.59	-0.0
3,825,753	-		MIT1002_03422	0.59	+1.6
3,825,775	-		MIT1002_03422	0.61	-2.2
3,825,790	+		MIT1002_03422	0.62	+0.8
3,825,800	+		MIT1002_03422	0.63	+2.9
3,825,800	+		MIT1002_03422	0.63	-3.2
3,825,800	+		MIT1002_03422	0.63	+0.3
3,825,800	+		MIT1002_03422	0.63	+0.0
3,825,800	+		MIT1002_03422	0.63	+2.2
3,825,808	-		MIT1002_03422	0.63	+1.3
3,825,808	-		MIT1002_03422	0.63	+0.5
3,825,808	-		MIT1002_03422	0.63	-0.5
3,825,808	-		MIT1002_03422	0.63	-0.7
3,825,808	-		MIT1002_03422	0.63	+0.8
3,825,808	-		MIT1002_03422	0.63	+1.2
3,825,808	-		MIT1002_03422	0.63	-1.8
3,825,808	-		MIT1002_03422	0.63	-1.4
3,825,808	-		MIT1002_03422	0.63	+0.5
3,825,919	-		MIT1002_03422	0.72	-2.5
3,825,928	+		MIT1002_03422	0.72	-0.3
3,825,946	-		MIT1002_03422	0.74	+0.3
3,825,946	-		MIT1002_03422	0.74	+0.5