Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03310

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
3,693,987	-				-0.0
3,694,007	+				-0.5
3,694,030	+				-1.0
3,694,094	+		MIT1002_03309	0.11	-0.7
3,694,095	-		MIT1002_03309	0.11	-2.3
3,694,102	+		MIT1002_03309	0.12	-1.5
3,694,110	-		MIT1002_03309	0.13	-2.0
3,694,110	-		MIT1002_03309	0.13	-0.4
3,694,110	-		MIT1002_03309	0.13	-1.7
3,694,110	-		MIT1002_03309	0.13	+0.6
3,694,153	-		MIT1002_03309	0.19	+0.8
3,694,158	-		MIT1002_03309	0.19	-1.2
3,694,200	+		MIT1002_03309	0.24	-0.7
3,694,200	+		MIT1002_03309	0.24	-1.6
3,694,218	-		MIT1002_03309	0.27	-0.3
3,694,250	+		MIT1002_03309	0.31	-0.3
3,694,299	+		MIT1002_03309	0.37	+0.3
3,694,307	-		MIT1002_03309	0.38	+1.3
3,694,307	-		MIT1002_03309	0.38	+0.4
3,694,319	+		MIT1002_03309	0.40	-1.7
3,694,320	+		MIT1002_03309	0.40	+0.8
3,694,327	+		MIT1002_03309	0.41	-0.8
3,694,373	+		MIT1002_03309	0.46	-1.2
3,694,375	+		MIT1002_03309	0.47	-1.6
3,694,383	-		MIT1002_03309	0.48	-4.1
3,694,404	+		MIT1002_03309	0.50	+0.4
3,694,484	-		MIT1002_03309	0.60	+1.3
3,694,676	+		MIT1002_03309	0.85	+0.4
3,694,676	+		MIT1002_03309	0.85	+0.3
3,694,676	+		MIT1002_03309	0.85	-1.0
3,694,684	-		MIT1002_03309	0.86	-0.8
3,694,684	-		MIT1002_03309	0.86	+1.6
3,694,684	-		MIT1002_03309	0.86	-0.7
3,694,696	+		MIT1002_03309	0.87	+0.6
3,694,702	+		MIT1002_03309	0.88	+1.1
3,694,704	-		MIT1002_03309	0.88	-0.3
3,694,725	+				+0.5
3,694,764	+				+0.3
3,694,777	+				+0.8
3,694,777	+				-2.6
3,694,798	-				+0.8
3,694,800	+				+1.2
3,694,800	+				+0.1
3,694,808	-				-1.0
3,694,808	-				+0.1
3,694,820	-				+0.9
3,694,829	-				+0.3
3,694,878	-				+0.7
3,694,964	-		MIT1002_03310	0.17	+1.8
3,695,061	-		MIT1002_03310	0.48	-3.8
3,695,080	+		MIT1002_03310	0.54	+0.5
3,695,088	-		MIT1002_03310	0.56	-0.2
3,695,088	-		MIT1002_03310	0.56	-0.1
3,695,146	+		MIT1002_03310	0.75	+1.0
3,695,180	+		MIT1002_03310	0.85	+2.1
3,695,258	+				-0.4
3,695,273	+				+0.9
3,695,312	-				+1.3
3,695,320	+				-0.1
3,695,320	+				+0.2
3,695,328	-		MIT1002_03311	0.12	+0.1
3,695,351	+		MIT1002_03311	0.27	-2.7
3,695,359	-		MIT1002_03311	0.33	+0.4
3,695,359	-		MIT1002_03311	0.33	-1.2
3,695,415	-		MIT1002_03311	0.71	+2.1
3,695,460	-				+0.1
3,695,667	+				-1.4
3,695,669	+				+0.6
3,695,675	-				+0.2
3,695,713	+		MIT1002_03312	0.13	+0.2
3,695,811	+		MIT1002_03312	0.24	-0.8
3,695,813	+		MIT1002_03312	0.24	-0.9
3,695,830	+		MIT1002_03312	0.26	-0.2
3,695,956	+		MIT1002_03312	0.40	-2.1
3,695,968	+		MIT1002_03312	0.42	-4.0
3,696,072	-		MIT1002_03312	0.53	+2.3
3,696,149	+		MIT1002_03312	0.62	-0.6
3,696,181	+		MIT1002_03312	0.65	+1.5
3,696,182	+		MIT1002_03312	0.65	-0.5
3,696,190	-		MIT1002_03312	0.66	+0.6