Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03172

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
3,533,667	+				-2.6
3,533,702	+				-1.6
3,533,723	+				+0.9
3,533,789	+				-0.4
3,533,789	+				-1.0
3,533,789	+				+0.2
3,533,789	+				+0.9
3,533,797	-				-2.1
3,533,797	-				-1.2
3,533,839	-				+0.2
3,533,841	+				+0.8
3,533,927	-		MIT1002_03171	0.16	+0.6
3,533,976	+		MIT1002_03171	0.23	-0.4
3,534,007	-		MIT1002_03171	0.27	+1.5
3,534,092	+		MIT1002_03171	0.38	+0.6
3,534,092	+		MIT1002_03171	0.38	+1.0
3,534,102	+		MIT1002_03171	0.40	+0.3
3,534,149	+		MIT1002_03171	0.46	+3.1
3,534,173	-		MIT1002_03171	0.49	+1.1
3,534,202	+		MIT1002_03171	0.53	+1.2
3,534,224	-		MIT1002_03171	0.56	+1.1
3,534,268	+		MIT1002_03171	0.62	+0.4
3,534,273	+		MIT1002_03171	0.63	-0.3
3,534,304	-		MIT1002_03171	0.67	+0.4
3,534,404	+		MIT1002_03171	0.81	+0.4
3,534,463	+		MIT1002_03171	0.89	-0.0
3,534,623	-				-0.7
3,534,644	-				-0.0
3,534,644	-				+0.2
3,534,644	-				+0.5
3,534,668	+				+0.5
3,534,681	-				+0.9
3,534,684	-				-0.8
3,534,692	+				+0.5
3,534,722	+				+2.9
3,534,730	-				+1.1
3,534,730	-				+0.4
3,534,751	-				-0.1
3,534,782	+				+0.5
3,534,786	-				-0.4
3,534,841	-		MIT1002_03172	0.13	+1.1
3,534,955	+		MIT1002_03172	0.20	-0.3
3,534,955	+		MIT1002_03172	0.20	-1.9
3,534,958	-		MIT1002_03172	0.20	-0.0
3,534,982	-		MIT1002_03172	0.21	+0.8
3,535,072	+		MIT1002_03172	0.27	+0.0
3,535,080	-		MIT1002_03172	0.27	-0.0
3,535,080	-		MIT1002_03172	0.27	+0.4
3,535,080	-		MIT1002_03172	0.27	+0.3
3,535,082	+		MIT1002_03172	0.27	+1.3
3,535,129	+		MIT1002_03172	0.30	+0.9
3,535,129	+		MIT1002_03172	0.30	+1.5
3,535,137	-		MIT1002_03172	0.31	+0.5
3,535,337	-		MIT1002_03172	0.42	-1.2
3,535,395	+		MIT1002_03172	0.46	+1.4
3,535,404	+		MIT1002_03172	0.46	+0.3
3,535,429	-		MIT1002_03172	0.48	+0.9
3,535,476	-		MIT1002_03172	0.51	-1.3
3,535,504	-		MIT1002_03172	0.52	+1.1
3,535,710	+		MIT1002_03172	0.65	+0.7
3,535,771	+		MIT1002_03172	0.68	+0.4
3,535,788	-		MIT1002_03172	0.69	-2.3
3,535,842	-		MIT1002_03172	0.73	-0.7
3,535,916	+		MIT1002_03172	0.77	+1.6
3,535,959	+		MIT1002_03172	0.80	-2.0
3,535,967	-		MIT1002_03172	0.80	+4.4
3,536,076	+		MIT1002_03172	0.87	+0.0
3,536,076	+		MIT1002_03172	0.87	-0.3
3,536,084	-		MIT1002_03172	0.87	-2.0
3,536,084	-		MIT1002_03172	0.87	-2.2
3,536,084	-		MIT1002_03172	0.87	-2.2
3,536,084	-		MIT1002_03172	0.87	+1.2
3,536,084	-		MIT1002_03172	0.87	+0.7
3,536,122	+		MIT1002_03172	0.89	+0.5
3,536,130	-		MIT1002_03172	0.90	+1.1
3,536,130	-		MIT1002_03172	0.90	+2.0
3,536,130	-		MIT1002_03172	0.90	+0.5
3,536,147	+				+1.2
3,536,167	-				-2.0
3,536,168	-				-0.1
3,536,212	+				-0.1
3,536,276	+				-0.7
3,536,289	+				-1.5
3,536,773	-				-0.8
3,536,787	+				-1.5
3,536,800	+				+0.0
3,536,810	-				-0.9
3,536,813	-				+0.0
3,536,850	+				-3.1
3,536,850	+				-0.4
3,536,857	+				+0.1
3,536,858	-				-0.4
3,536,858	-				-0.5
3,536,858	-				+0.8
3,536,858	-				-1.2
3,536,872	+				+1.4
3,536,924	+				-0.7
3,536,988	-		MIT1002_03174	0.31	+0.3
3,537,056	+		MIT1002_03174	0.67	-1.3
3,537,056	-		MIT1002_03174	0.67	-1.8
3,537,059	+		MIT1002_03174	0.68	+0.4
3,537,228	-				+0.1
3,537,268	-		MIT1002_03175	0.13	-0.5