Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03069

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
3,422,799	-				-0.2
3,422,822	-		MIT1002_03068	0.13	-0.5
3,422,824	-		MIT1002_03068	0.14	+0.5
3,422,910	+		MIT1002_03068	0.27	+0.9
3,422,913	-		MIT1002_03068	0.27	-1.7
3,422,918	-		MIT1002_03068	0.28	+1.1
3,422,960	+		MIT1002_03068	0.35	+0.4
3,422,979	-		MIT1002_03068	0.38	+0.3
3,422,998	+		MIT1002_03068	0.41	+1.8
3,423,034	+		MIT1002_03068	0.46	+0.8
3,423,035	-		MIT1002_03068	0.46	+0.8
3,423,035	-		MIT1002_03068	0.46	-2.3
3,423,240	-		MIT1002_03068	0.78	-0.8
3,423,265	+		MIT1002_03068	0.82	-2.3
3,423,272	-		MIT1002_03068	0.83	+0.9
3,423,285	+		MIT1002_03068	0.85	-0.5
3,423,305	+		MIT1002_03068	0.88	-0.6
3,423,380	+				+0.2
3,423,381	-				-0.3
3,423,388	-				+1.2
3,423,388	-				-1.2
3,423,388	-				+0.9
3,423,388	-				-1.2
3,423,394	+				-2.4
3,423,488	-				+0.2
3,423,495	+				+0.0
3,423,656	+				-0.3
3,423,826	-				+1.7
3,423,827	-				+0.0
3,423,867	-		MIT1002_03069	0.13	+0.5
3,423,918	+		MIT1002_03069	0.22	-1.2
3,423,931	+		MIT1002_03069	0.24	+0.6
3,423,934	+		MIT1002_03069	0.25	+1.1
3,423,939	-		MIT1002_03069	0.26	-0.5
3,423,941	+		MIT1002_03069	0.26	+1.7
3,423,942	-		MIT1002_03069	0.26	+0.4
3,423,944	-		MIT1002_03069	0.27	+0.4
3,423,957	-		MIT1002_03069	0.29	+0.3
3,423,964	+		MIT1002_03069	0.30	+2.0
3,423,972	-		MIT1002_03069	0.32	-0.5
3,423,990	+		MIT1002_03069	0.35	+0.3
3,423,991	+		MIT1002_03069	0.35	+0.3
3,423,999	-		MIT1002_03069	0.37	-3.4
3,424,020	-		MIT1002_03069	0.41	-0.3
3,424,166	+		MIT1002_03069	0.67	-0.7
3,424,303	-				-0.8
3,424,437	+				+0.4
3,424,530	+				-0.1
3,424,603	+		MIT1002_03070	0.24	-1.8
3,424,625	+		MIT1002_03070	0.29	+1.1
3,424,733	+		MIT1002_03070	0.54	-0.2
3,424,792	+		MIT1002_03070	0.67	+0.6
3,424,802	-		MIT1002_03070	0.69	-2.7
3,424,831	+		MIT1002_03070	0.76	+0.4
3,424,831	+		MIT1002_03070	0.76	-0.5
3,424,839	-		MIT1002_03070	0.78	+1.0
3,424,839	-		MIT1002_03070	0.78	-1.2
3,424,839	-		MIT1002_03070	0.78	+1.1
3,424,862	+		MIT1002_03070	0.83	+0.5
3,425,075	+				-0.8
3,425,135	+				-0.9
3,425,155	-				+0.7
3,425,166	+				+0.2
3,425,166	+				-1.7
3,425,174	-				-0.9
3,425,174	-				-1.1
3,425,283	+				-3.2
3,425,291	-				-1.2
3,425,291	-				-0.4