Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02858

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
3,171,419	-		MIT1002_02856	0.89	+2.4
3,171,419	-		MIT1002_02856	0.89	-0.0
3,171,437	-				+2.3
3,171,465	+				-1.5
3,171,545	+				-1.8
3,171,688	+		MIT1002_02857	0.16	-0.0
3,171,742	+		MIT1002_02857	0.22	+0.1
3,171,756	-		MIT1002_02857	0.24	+1.3
3,171,773	+		MIT1002_02857	0.26	+1.1
3,171,781	-		MIT1002_02857	0.27	+0.5
3,171,829	+		MIT1002_02857	0.32	+2.4
3,171,846	+		MIT1002_02857	0.34	+1.0
3,171,847	+		MIT1002_02857	0.34	-2.4
3,171,854	-		MIT1002_02857	0.35	-0.3
3,171,865	+		MIT1002_02857	0.36	-0.3
3,171,888	-		MIT1002_02857	0.39	+1.1
3,171,896	-		MIT1002_02857	0.40	+0.4
3,171,981	-		MIT1002_02857	0.49	+0.5
3,172,041	+		MIT1002_02857	0.56	+0.1
3,172,096	-		MIT1002_02857	0.62	+2.4
3,172,208	-		MIT1002_02857	0.75	-2.3
3,172,248	-		MIT1002_02857	0.80	-2.9
3,172,305	-		MIT1002_02857	0.86	+0.0
3,172,340	-				+0.3
3,172,450	-				+2.6
3,172,536	+		MIT1002_02858	0.16	+1.8
3,172,536	+		MIT1002_02858	0.16	+1.1
3,172,536	+		MIT1002_02858	0.16	-1.3
3,172,536	+		MIT1002_02858	0.16	+1.1
3,172,538	-		MIT1002_02858	0.17	+0.4
3,172,544	-		MIT1002_02858	0.17	+1.1
3,172,544	-		MIT1002_02858	0.17	+2.2
3,172,546	+		MIT1002_02858	0.18	+2.7
3,172,554	-		MIT1002_02858	0.19	-1.3
3,172,567	+		MIT1002_02858	0.21	+1.1
3,172,637	-		MIT1002_02858	0.30	-0.1
3,172,642	-		MIT1002_02858	0.31	-1.6
3,172,642	-		MIT1002_02858	0.31	-0.0
3,172,649	+		MIT1002_02858	0.32	-1.7
3,172,729	+		MIT1002_02858	0.42	+2.1
3,172,808	+		MIT1002_02858	0.53	-1.9
3,172,826	-		MIT1002_02858	0.55	-2.9
3,172,840	+		MIT1002_02858	0.57	+1.1
3,172,891	+		MIT1002_02858	0.64	+0.9
3,172,946	+		MIT1002_02858	0.72	+0.2
3,172,988	-		MIT1002_02858	0.77	-1.5
3,173,100	+				+0.3
3,173,229	-				+0.5
3,173,359	+				-0.8
3,173,367	-				-3.2
3,173,380	-				+0.1
3,173,534	+		MIT1002_02859	0.16	-0.4
3,173,589	+		MIT1002_02859	0.20	+0.1
3,173,607	-		MIT1002_02859	0.21	-3.5
3,173,607	-		MIT1002_02859	0.21	-1.7
3,173,639	+		MIT1002_02859	0.23	+0.4
3,173,752	+		MIT1002_02859	0.31	-2.9
3,173,752	+		MIT1002_02859	0.31	-0.1
3,173,805	-		MIT1002_02859	0.34	-1.4
3,173,810	-		MIT1002_02859	0.35	+0.5
3,173,818	-		MIT1002_02859	0.35	+0.5
3,173,823	-		MIT1002_02859	0.36	+1.0
3,173,864	+		MIT1002_02859	0.38	+1.2
3,173,925	-		MIT1002_02859	0.42	-2.7
3,173,932	-		MIT1002_02859	0.43	+0.1
3,174,091	-		MIT1002_02859	0.53	-0.3
3,174,093	+		MIT1002_02859	0.54	+0.1
3,174,094	-		MIT1002_02859	0.54	+1.1
3,174,152	+		MIT1002_02859	0.58	+0.8