Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02597

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
2,896,476	+		MIT1002_02595	0.50	-0.9
2,896,586	+		MIT1002_02595	0.62	+0.3
2,896,640	+		MIT1002_02595	0.67	-0.4
2,896,648	-		MIT1002_02595	0.68	-1.6
2,896,699	-		MIT1002_02595	0.73	-1.1
2,896,726	+		MIT1002_02595	0.76	+0.3
2,896,804	+		MIT1002_02595	0.84	-2.8
2,896,804	+		MIT1002_02595	0.84	-0.5
2,896,811	+		MIT1002_02595	0.85	-0.6
2,896,819	-		MIT1002_02595	0.86	-2.4
2,896,819	-		MIT1002_02595	0.86	+0.9
2,896,819	-		MIT1002_02595	0.86	+0.9
2,896,819	-		MIT1002_02595	0.86	+1.0
2,896,839	+		MIT1002_02595	0.88	+0.7
2,896,839	+		MIT1002_02595	0.88	+0.3
2,896,862	-				+2.1
2,896,875	-				-2.7
2,896,972	+				-0.9
2,896,976	+				+2.0
2,897,073	+		MIT1002_02596	0.12	+0.2
2,897,073	+		MIT1002_02596	0.12	+0.1
2,897,073	+		MIT1002_02596	0.12	-2.4
2,897,132	+		MIT1002_02596	0.30	-0.0
2,897,149	-		MIT1002_02596	0.35	+0.9
2,897,202	+		MIT1002_02596	0.51	+1.3
2,897,280	+		MIT1002_02596	0.74	-0.9
2,897,280	+		MIT1002_02596	0.74	-2.7
2,897,280	+		MIT1002_02596	0.74	+0.7
2,897,288	-		MIT1002_02596	0.77	-0.7
2,897,297	+		MIT1002_02596	0.80	-0.2
2,897,303	-		MIT1002_02596	0.81	-0.8
2,897,310	+		MIT1002_02596	0.83	+0.6
2,897,310	+		MIT1002_02596	0.83	-1.9
2,897,310	+		MIT1002_02596	0.83	+0.1
2,897,310	+		MIT1002_02596	0.83	-1.9
2,897,310	+		MIT1002_02596	0.83	+1.4
2,897,315	+		MIT1002_02596	0.85	+0.2
2,897,378	+				+0.8
2,897,430	-				+0.6
2,897,466	-				-2.3
2,897,613	-		MIT1002_02597	0.16	-3.1
2,897,631	+		MIT1002_02597	0.18	-1.9
2,897,631	+		MIT1002_02597	0.18	-3.8
2,897,631	+		MIT1002_02597	0.18	-3.9
2,897,631	+		MIT1002_02597	0.18	-0.6
2,897,639	-		MIT1002_02597	0.19	+0.0
2,897,659	+		MIT1002_02597	0.21	+2.4
2,897,720	+		MIT1002_02597	0.27	+0.1
2,897,821	-		MIT1002_02597	0.38	-0.0
2,897,911	-		MIT1002_02597	0.48	+1.0
2,897,978	-		MIT1002_02597	0.55	+0.4
2,897,981	+		MIT1002_02597	0.56	-0.5
2,898,024	+		MIT1002_02597	0.60	+0.7
2,898,024	+		MIT1002_02597	0.60	-3.4
2,898,024	+		MIT1002_02597	0.60	-1.8
2,898,032	-		MIT1002_02597	0.61	-0.3
2,898,032	-		MIT1002_02597	0.61	-0.2
2,898,052	-		MIT1002_02597	0.63	-0.9
2,898,074	+		MIT1002_02597	0.66	-1.9
2,898,074	+		MIT1002_02597	0.66	+0.6
2,898,074	+		MIT1002_02597	0.66	-0.6
2,898,211	+		MIT1002_02597	0.81	-0.2
2,898,307	-				+1.1
2,898,313	+				+1.3
2,898,356	+				-3.8
2,898,370	+				+0.6
2,898,385	-				+0.3
2,898,402	+				+0.4
2,898,402	+				-0.1
2,898,402	+				+2.8
2,898,410	-				+2.3
2,898,410	-				+0.5
2,898,484	+				-0.2
2,898,595	+				+2.1
2,898,603	-				-1.5
2,898,637	-				+1.0
2,898,664	-		MIT1002_02598	0.11	+0.3
2,898,691	-		MIT1002_02598	0.13	+0.3
2,898,691	-		MIT1002_02598	0.13	-1.1
2,898,691	-		MIT1002_02598	0.13	-0.2
2,898,718	-		MIT1002_02598	0.16	-3.4
2,898,728	-		MIT1002_02598	0.17	+1.0
2,898,790	+		MIT1002_02598	0.23	+0.5
2,898,790	+		MIT1002_02598	0.23	+1.9
2,898,831	-		MIT1002_02598	0.27	+0.5
2,898,843	-		MIT1002_02598	0.28	+2.4
2,898,853	-		MIT1002_02598	0.29	-0.5
2,898,853	-		MIT1002_02598	0.29	+0.8
2,898,855	+		MIT1002_02598	0.29	+0.9
2,898,855	+		MIT1002_02598	0.29	+0.1
2,898,855	+		MIT1002_02598	0.29	+0.3
2,898,855	+		MIT1002_02598	0.29	+0.7
2,898,855	+		MIT1002_02598	0.29	+1.7
2,898,855	+		MIT1002_02598	0.29	+0.0
2,898,855	+		MIT1002_02598	0.29	-1.9
2,898,855	+		MIT1002_02598	0.29	+0.3
2,898,855	+		MIT1002_02598	0.29	-0.6
2,898,855	+		MIT1002_02598	0.29	+0.9
2,898,863	-		MIT1002_02598	0.30	-0.3
2,898,863	-		MIT1002_02598	0.30	+0.4
2,898,863	-		MIT1002_02598	0.30	+0.1
2,898,863	-		MIT1002_02598	0.30	+0.9
2,898,863	-		MIT1002_02598	0.30	+0.5
2,898,863	-		MIT1002_02598	0.30	+1.1
2,898,863	-		MIT1002_02598	0.30	-1.6
2,898,863	-		MIT1002_02598	0.30	+0.5
2,898,863	-		MIT1002_02598	0.30	-2.2
2,898,863	-		MIT1002_02598	0.30	+1.2
2,898,863	-		MIT1002_02598	0.30	-0.8
2,898,863	-		MIT1002_02598	0.30	+0.2
2,898,863	-		MIT1002_02598	0.30	+1.4
2,898,863	-		MIT1002_02598	0.30	+1.1
2,898,863	-		MIT1002_02598	0.30	+0.4
2,898,863	-		MIT1002_02598	0.30	-0.6
2,898,863	-		MIT1002_02598	0.30	-0.6
2,898,863	-		MIT1002_02598	0.30	-1.1
2,898,927	-		MIT1002_02598	0.36	-1.9
2,898,950	+		MIT1002_02598	0.38	-0.9
2,898,950	+		MIT1002_02598	0.38	-0.9
2,898,958	-		MIT1002_02598	0.39	-0.5
2,898,960	+		MIT1002_02598	0.39	-0.6
2,898,960	+		MIT1002_02598	0.39	+0.5
2,898,960	+		MIT1002_02598	0.39	-0.3
2,898,965	+		MIT1002_02598	0.39	-0.3
2,898,965	+		MIT1002_02598	0.39	+0.4
2,898,989	+		MIT1002_02598	0.42	+1.1
2,899,055	+		MIT1002_02598	0.48	+0.6
2,899,085	-		MIT1002_02598	0.51	-0.1
2,899,086	+		MIT1002_02598	0.51	-1.5
2,899,086	+		MIT1002_02598	0.51	+0.7
2,899,094	-		MIT1002_02598	0.52	+1.1
2,899,100	+		MIT1002_02598	0.52	-1.1
2,899,100	+		MIT1002_02598	0.52	-2.5
2,899,100	+		MIT1002_02598	0.52	-1.1
2,899,108	-		MIT1002_02598	0.53	+0.5
2,899,202	+		MIT1002_02598	0.62	-2.1
2,899,208	-		MIT1002_02598	0.62	+1.3
2,899,208	-		MIT1002_02598	0.62	+1.2
2,899,212	+		MIT1002_02598	0.63	-0.6
2,899,220	-		MIT1002_02598	0.63	-1.1
2,899,224	+		MIT1002_02598	0.64	-1.0
2,899,261	-		MIT1002_02598	0.67	+1.4
2,899,277	-		MIT1002_02598	0.69	+0.7
2,899,369	+		MIT1002_02598	0.78	-3.4
2,899,370	+		MIT1002_02598	0.78	-1.9