Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02561

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
2,858,505	+		MIT1002_02560	0.16	+0.2
2,858,505	+		MIT1002_02560	0.16	+0.5
2,858,528	+		MIT1002_02560	0.18	-2.8
2,858,540	+		MIT1002_02560	0.19	+1.1
2,858,548	-		MIT1002_02560	0.20	-3.0
2,858,579	+		MIT1002_02560	0.22	-0.1
2,858,589	-		MIT1002_02560	0.23	-2.3
2,858,619	-		MIT1002_02560	0.26	+0.8
2,858,654	-		MIT1002_02560	0.29	+1.3
2,858,687	+		MIT1002_02560	0.31	-0.0
2,858,687	+		MIT1002_02560	0.31	-0.5
2,858,862	+		MIT1002_02560	0.46	-0.6
2,858,862	+		MIT1002_02560	0.46	-2.3
2,858,875	-		MIT1002_02560	0.48	-1.1
2,858,999	+		MIT1002_02560	0.58	+0.1
2,859,034	+		MIT1002_02560	0.61	-0.4
2,859,120	-		MIT1002_02560	0.69	+0.5
2,859,135	+		MIT1002_02560	0.70	-1.3
2,859,191	-		MIT1002_02560	0.75	-1.0
2,859,204	+		MIT1002_02560	0.76	-0.9
2,859,263	+		MIT1002_02560	0.81	+0.3
2,859,273	+		MIT1002_02560	0.82	+1.1
2,859,281	-		MIT1002_02560	0.82	-0.6
2,859,281	-		MIT1002_02560	0.82	-2.1
2,859,289	-		MIT1002_02560	0.83	-1.1
2,859,333	+		MIT1002_02560	0.87	-0.4
2,859,358	+		MIT1002_02560	0.89	-2.8
2,859,358	+		MIT1002_02560	0.89	-4.0
2,859,411	+				+2.4
2,859,472	-				+0.5
2,859,570	+				+2.8
2,859,570	+				-1.4
2,859,583	+		MIT1002_02561	0.12	-0.7
2,859,597	-		MIT1002_02561	0.14	-0.5
2,859,774	+		MIT1002_02561	0.38	+0.1
2,859,836	+		MIT1002_02561	0.47	-0.2
2,859,841	+		MIT1002_02561	0.47	-0.4
2,859,844	-		MIT1002_02561	0.48	-0.3
2,859,871	+		MIT1002_02561	0.52	-2.1
2,859,871	+		MIT1002_02561	0.52	+0.4
2,859,890	+		MIT1002_02561	0.54	-1.3
2,859,892	+		MIT1002_02561	0.54	+0.3
2,859,892	+		MIT1002_02561	0.54	-3.1
2,859,898	-		MIT1002_02561	0.55	-0.7
2,859,900	-		MIT1002_02561	0.56	+0.2
2,859,900	-		MIT1002_02561	0.56	+1.1
2,859,962	+		MIT1002_02561	0.64	-1.8
2,859,970	-		MIT1002_02561	0.65	+0.9
2,859,970	-		MIT1002_02561	0.65	-2.4
2,859,981	+		MIT1002_02561	0.67	-0.6
2,860,215	+				-1.6
2,860,241	+				-0.3
2,860,244	-				-2.0
2,860,407	+				-1.3
2,860,407	+				+0.2
2,860,415	-				-2.3
2,860,427	-				-3.4
2,860,450	-		MIT1002_02562	0.11	+0.2
2,860,655	+		MIT1002_02562	0.39	+1.0
2,860,711	+		MIT1002_02562	0.47	+1.9
2,860,719	-		MIT1002_02562	0.48	-0.9
2,860,783	-		MIT1002_02562	0.57	-1.1
2,860,783	-		MIT1002_02562	0.57	-1.3
2,860,868	+		MIT1002_02562	0.69	+0.4
2,860,923	-		MIT1002_02562	0.77	+0.4
2,860,985	+		MIT1002_02562	0.86	+0.8
2,860,985	+		MIT1002_02562	0.86	+1.9
2,860,991	-		MIT1002_02562	0.87	+0.6
2,860,993	-		MIT1002_02562	0.87	+0.6
2,861,044	+				+0.3
2,861,052	-				-0.9
2,861,061	+				-0.3
2,861,087	-				-0.8
2,861,095	-				+1.8
2,861,113	+				+0.8
2,861,113	+				-2.3
2,861,113	+				+0.2
2,861,121	-				-1.4
2,861,155	-				+0.7
2,861,157	+				-0.5
2,861,165	-				-0.4
2,861,165	-				+0.2
2,861,185	+				-0.3
2,861,192	-				-0.0
2,861,200	-		MIT1002_02563	0.11	-0.4