Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02318

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
2,584,546	-		MIT1002_02317	0.29	-0.2
2,584,591	+		MIT1002_02317	0.32	-1.2
2,584,591	+		MIT1002_02317	0.32	+0.1
2,584,591	+		MIT1002_02317	0.32	-3.5
2,584,599	-		MIT1002_02317	0.33	+0.9
2,584,599	-		MIT1002_02317	0.33	+0.4
2,584,627	+		MIT1002_02317	0.35	+0.2
2,584,628	+		MIT1002_02317	0.35	-0.1
2,584,633	+		MIT1002_02317	0.36	+0.9
2,584,651	-		MIT1002_02317	0.37	+1.4
2,584,761	+		MIT1002_02317	0.46	+0.3
2,584,769	-		MIT1002_02317	0.47	-1.1
2,584,785	+		MIT1002_02317	0.48	-0.4
2,584,793	-		MIT1002_02317	0.49	-0.9
2,584,793	-		MIT1002_02317	0.49	+0.3
2,584,888	+		MIT1002_02317	0.56	-2.8
2,584,907	-		MIT1002_02317	0.58	+0.6
2,585,014	-		MIT1002_02317	0.67	+1.8
2,585,043	-		MIT1002_02317	0.69	-0.6
2,585,122	+		MIT1002_02317	0.75	+0.0
2,585,169	-		MIT1002_02317	0.79	-0.1
2,585,180	+		MIT1002_02317	0.80	-0.9
2,585,188	-		MIT1002_02317	0.81	-0.9
2,585,188	-		MIT1002_02317	0.81	+0.5
2,585,188	-		MIT1002_02317	0.81	-3.0
2,585,188	-		MIT1002_02317	0.81	+0.2
2,585,188	-		MIT1002_02317	0.81	+1.4
2,585,188	-		MIT1002_02317	0.81	+1.1
2,585,188	-		MIT1002_02317	0.81	-0.9
2,585,188	-		MIT1002_02317	0.81	+1.5
2,585,188	-		MIT1002_02317	0.81	-1.6
2,585,188	-		MIT1002_02317	0.81	+1.7
2,585,214	+		MIT1002_02317	0.83	-0.1
2,585,280	-		MIT1002_02317	0.88	-0.7
2,585,394	+				+1.4
2,585,420	+				+0.1
2,585,420	+				-0.4
2,585,428	-				+0.5
2,585,428	-				-0.9
2,585,453	-				+0.4
2,585,453	-				+1.1
2,585,497	-				-3.2
2,585,646	-		MIT1002_02318	0.30	+0.1
2,585,653	+		MIT1002_02318	0.31	-0.6
2,585,653	+		MIT1002_02318	0.31	-0.9
2,585,658	+		MIT1002_02318	0.32	+0.0
2,585,666	+		MIT1002_02318	0.33	-2.2
2,585,807	+		MIT1002_02318	0.54	+0.2
2,585,817	+		MIT1002_02318	0.55	-0.1
2,585,835	+		MIT1002_02318	0.58	+2.0
2,585,882	+		MIT1002_02318	0.65	-1.2
2,585,888	-		MIT1002_02318	0.66	-0.8
2,585,890	-		MIT1002_02318	0.66	+0.8
2,585,890	-		MIT1002_02318	0.66	+0.4
2,585,895	-		MIT1002_02318	0.67	+0.1
2,585,908	+		MIT1002_02318	0.69	-2.2
2,585,932	-		MIT1002_02318	0.72	-1.6
2,585,934	+		MIT1002_02318	0.72	-0.1
2,586,017	-		MIT1002_02318	0.84	+0.9
2,586,035	-		MIT1002_02318	0.87	-0.6
2,586,041	+		MIT1002_02318	0.88	+0.8
2,586,049	-		MIT1002_02318	0.89	+0.2
2,586,049	-		MIT1002_02318	0.89	+0.4
2,586,068	-				+1.0
2,586,087	-				+0.0
2,586,297	-				+0.6
2,586,317	+				+2.1
2,586,345	+				+0.8
2,586,380	+				+1.2
2,586,389	-				+0.4
2,586,402	+				+1.3
2,586,402	+				-2.3
2,586,410	-				+1.0
2,586,489	+				+0.7
2,586,522	+				-0.6
2,586,566	-				-0.6
2,586,614	+				+0.4
2,586,614	+				+1.2
2,586,639	-				-0.9
2,586,654	+				+1.6
2,586,730	-		MIT1002_02319	0.10	-0.4
2,586,764	-		MIT1002_02319	0.12	+1.1
2,586,959	-		MIT1002_02319	0.19	-2.3
2,586,976	+		MIT1002_02319	0.20	+0.5
2,586,994	+		MIT1002_02319	0.20	-0.8
2,586,994	+		MIT1002_02319	0.20	+1.4
2,587,042	-		MIT1002_02319	0.22	+1.7