Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02162

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
2,417,300	+		MIT1002_02159	0.65	-0.4
2,417,308	-		MIT1002_02159	0.67	-3.1
2,417,315	-		MIT1002_02159	0.69	+1.1
2,417,408	-				-1.8
2,417,414	+				-3.5
2,417,419	-				-0.9
2,417,598	+				-0.7
2,417,598	+				-0.6
2,417,598	+				+0.6
2,417,748	+				-0.4
2,417,849	+				+1.1
2,417,849	+				-0.2
2,417,859	-				-2.8
2,417,909	-				+2.1
2,417,916	+				+1.0
2,417,931	-				-0.8
2,417,940	+				-3.2
2,418,091	+				-0.6
2,418,091	+				+0.7
2,418,091	+				+1.7
2,418,268	-				-1.9
2,418,310	+				+0.1
2,418,318	-				+1.4
2,418,342	-				-1.6
2,418,352	-		MIT1002_02162	0.10	-0.3
2,418,412	+		MIT1002_02162	0.17	-0.9
2,418,420	-		MIT1002_02162	0.18	+0.6
2,418,558	+		MIT1002_02162	0.33	-0.4
2,418,620	-		MIT1002_02162	0.40	+0.5
2,418,620	-		MIT1002_02162	0.40	-1.0
2,418,704	-		MIT1002_02162	0.50	+0.2
2,418,716	+		MIT1002_02162	0.51	-0.1
2,418,726	+		MIT1002_02162	0.52	+0.2
2,418,726	+		MIT1002_02162	0.52	-0.9
2,418,734	-		MIT1002_02162	0.53	-1.0
2,418,773	+		MIT1002_02162	0.57	-0.5
2,418,778	-		MIT1002_02162	0.58	-1.7
2,418,783	-		MIT1002_02162	0.58	+2.3
2,418,793	+		MIT1002_02162	0.60	-0.2
2,418,801	-		MIT1002_02162	0.60	+1.3
2,418,811	-		MIT1002_02162	0.62	+0.4
2,418,883	+		MIT1002_02162	0.70	+0.4
2,418,908	+		MIT1002_02162	0.73	+0.6
2,418,916	-		MIT1002_02162	0.73	-1.8
2,418,916	-		MIT1002_02162	0.73	+1.8
2,418,961	+		MIT1002_02162	0.78	+0.4
2,419,035	-		MIT1002_02162	0.87	-0.1
2,419,083	+				+0.9
2,419,083	+				+0.9
2,419,091	-				+1.2
2,419,103	-				-0.4
2,419,109	+				-0.1
2,419,382	+		MIT1002_02163	0.11	-0.6
2,419,422	+		MIT1002_02163	0.20	-4.4
2,419,425	-		MIT1002_02163	0.21	+0.1
2,419,430	-		MIT1002_02163	0.22	+0.4
2,419,452	+		MIT1002_02163	0.27	+1.9
2,419,598	+		MIT1002_02163	0.59	-1.3
2,419,612	-		MIT1002_02163	0.62	-0.8
2,419,625	+		MIT1002_02163	0.65	-0.3
2,419,625	+		MIT1002_02163	0.65	-0.0
2,419,630	+		MIT1002_02163	0.66	-2.9
2,419,653	-		MIT1002_02163	0.72	-0.7
2,419,661	-		MIT1002_02163	0.73	+0.1
2,419,703	+		MIT1002_02163	0.83	-3.2
2,419,867	+				-0.9
2,419,867	+				-1.7
2,419,867	+				-2.7
2,419,867	+				+0.8
2,419,867	+				-3.2
2,419,867	+				+0.8
2,419,867	+				-3.2
2,419,867	+				-0.0
2,419,867	+				-0.8
2,419,867	+				-1.7
2,419,875	-				-1.2
2,419,875	-				+0.6
2,419,875	-				+0.3
2,419,875	-				+0.1
2,419,875	-				+0.5
2,419,875	-				+0.5
2,419,885	-				+0.1
2,419,890	-				-2.1
2,420,000	-				-0.0