Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02143

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
2,402,806	+		MIT1002_02142	0.13	-0.6
2,402,869	+		MIT1002_02142	0.21	+2.7
2,402,903	-		MIT1002_02142	0.26	-1.7
2,402,941	-		MIT1002_02142	0.30	-0.5
2,402,980	-		MIT1002_02142	0.35	+0.4
2,402,981	+		MIT1002_02142	0.35	-0.8
2,402,981	-		MIT1002_02142	0.35	-2.3
2,402,981	-		MIT1002_02142	0.35	-2.5
2,402,981	-		MIT1002_02142	0.35	-0.0
2,403,039	+		MIT1002_02142	0.43	-1.7
2,403,047	-		MIT1002_02142	0.44	-1.5
2,403,150	-		MIT1002_02142	0.57	-3.1
2,403,334	-		MIT1002_02142	0.80	-0.5
2,403,345	+		MIT1002_02142	0.81	-2.5
2,403,502	-				-2.3
2,403,555	+				-2.1
2,403,563	-		MIT1002_02143	0.11	-2.3
2,403,629	-		MIT1002_02143	0.20	-1.4
2,403,817	-		MIT1002_02143	0.45	-0.9
2,403,856	-		MIT1002_02143	0.51	-1.7
2,403,944	+		MIT1002_02143	0.63	-0.9
2,403,944	+		MIT1002_02143	0.63	-2.9
2,404,080	+		MIT1002_02143	0.81	-0.3
2,404,085	+		MIT1002_02143	0.82	-0.2
2,404,103	+		MIT1002_02143	0.85	+2.1
2,404,180	+				-2.1
2,404,222	+				-1.3
2,404,247	+				-0.0
2,404,247	+				-1.4
2,404,333	+				-1.2
2,404,351	+				+0.1
2,404,359	-				+0.5
2,404,376	+		MIT1002_02144	0.12	-1.1
2,404,384	+		MIT1002_02144	0.14	-0.2
2,404,417	-		MIT1002_02144	0.19	-3.1
2,404,432	+		MIT1002_02144	0.21	+0.8
2,404,565	+		MIT1002_02144	0.43	+1.3
2,404,620	+		MIT1002_02144	0.51	+1.0
2,404,672	+		MIT1002_02144	0.60	-0.9
2,404,743	-		MIT1002_02144	0.71	+1.2
2,404,743	-		MIT1002_02144	0.71	+0.1
2,404,783	-		MIT1002_02144	0.77	+0.6
2,404,794	-		MIT1002_02144	0.79	-0.7
2,404,796	+		MIT1002_02144	0.79	+1.2
2,404,802	+		MIT1002_02144	0.80	-1.4
2,404,813	-		MIT1002_02144	0.82	+0.3
2,404,817	+		MIT1002_02144	0.83	-0.7
2,404,825	-		MIT1002_02144	0.84	+0.5
2,404,832	+		MIT1002_02144	0.85	-0.2
2,404,861	-		MIT1002_02144	0.90	-0.9
2,404,875	+				+1.3
2,404,875	+				-1.1
2,404,942	-				+1.9
2,404,985	-				-1.0
2,405,035	-		MIT1002_02145	0.13	+1.1
2,405,103	+		MIT1002_02145	0.23	-2.2
2,405,111	-		MIT1002_02145	0.24	-2.6