Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01782

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
1,977,905	+		MIT1002_01781	0.50	+0.8
1,977,932	+		MIT1002_01781	0.51	+0.7
1,977,940	-		MIT1002_01781	0.52	+1.2
1,977,940	-		MIT1002_01781	0.52	-0.4
1,977,940	-		MIT1002_01781	0.52	-0.3
1,977,947	+		MIT1002_01781	0.52	-1.1
1,977,955	-		MIT1002_01781	0.53	+1.1
1,977,955	-		MIT1002_01781	0.53	+0.7
1,978,050	+		MIT1002_01781	0.58	-2.6
1,978,050	+		MIT1002_01781	0.58	-0.9
1,978,052	+		MIT1002_01781	0.58	-2.9
1,978,279	+		MIT1002_01781	0.72	+0.2
1,978,299	+		MIT1002_01781	0.73	-0.3
1,978,299	+		MIT1002_01781	0.73	-1.1
1,978,504	+		MIT1002_01781	0.85	-1.3
1,978,504	+		MIT1002_01781	0.85	-1.2
1,978,517	-		MIT1002_01781	0.86	-1.1
1,978,539	-		MIT1002_01781	0.87	-0.8
1,978,643	+				+0.2
1,978,700	+				+0.8
1,978,701	-				+0.5
1,978,709	+				+0.6
1,978,709	+				-1.0
1,978,717	-				+0.7
1,978,722	+				-2.4
1,978,722	+				-0.9
1,978,749	+				-0.1
1,978,757	-				+0.6
1,978,843	-				-0.3
1,978,844	+				+0.4
1,978,850	-				-1.1
1,978,850	-				+2.3
1,978,850	-				-1.7
1,978,850	-				+0.6
1,978,992	-				-0.7
1,979,005	+				+2.1
1,979,067	+				+0.2
1,979,075	+				+0.1
1,979,075	+				+1.8
1,979,083	-				+0.3
1,979,210	+		MIT1002_01782	0.13	-3.8
1,979,213	-		MIT1002_01782	0.13	-1.5
1,979,215	+		MIT1002_01782	0.13	-1.3
1,979,218	-		MIT1002_01782	0.13	-0.1
1,979,221	-		MIT1002_01782	0.13	+0.1
1,979,223	-		MIT1002_01782	0.13	+2.0
1,979,223	-		MIT1002_01782	0.13	+2.4
1,979,258	-		MIT1002_01782	0.15	+1.3
1,979,291	+		MIT1002_01782	0.16	-2.5
1,979,323	-		MIT1002_01782	0.17	-1.0
1,979,338	+		MIT1002_01782	0.18	+0.5
1,979,365	-		MIT1002_01782	0.19	+1.5
1,979,367	-		MIT1002_01782	0.19	-0.9
1,979,380	+		MIT1002_01782	0.20	-1.1
1,979,438	-		MIT1002_01782	0.22	-0.6
1,979,438	-		MIT1002_01782	0.22	+0.2
1,979,442	+		MIT1002_01782	0.22	+0.3
1,979,450	-		MIT1002_01782	0.22	-0.3
1,979,468	+		MIT1002_01782	0.23	-2.4
1,979,551	+		MIT1002_01782	0.26	+0.2
1,979,551	+		MIT1002_01782	0.26	+2.0
1,979,561	+		MIT1002_01782	0.27	-3.8
1,979,569	-		MIT1002_01782	0.27	+0.8
1,979,569	-		MIT1002_01782	0.27	-3.2
1,979,569	-		MIT1002_01782	0.27	+2.3
1,979,641	+		MIT1002_01782	0.30	-0.2
1,979,688	+		MIT1002_01782	0.31	-0.6
1,979,733	+		MIT1002_01782	0.33	+0.5
1,979,744	-		MIT1002_01782	0.34	-0.1
1,979,746	+		MIT1002_01782	0.34	-0.9
1,979,773	+		MIT1002_01782	0.35	+0.5
1,979,814	+		MIT1002_01782	0.36	+0.4
1,979,824	+		MIT1002_01782	0.37	+0.2
1,979,867	-		MIT1002_01782	0.38	+0.7
1,979,872	-		MIT1002_01782	0.39	+0.8
1,979,921	+		MIT1002_01782	0.40	-1.2
1,980,215	-		MIT1002_01782	0.52	+0.2
1,980,226	-		MIT1002_01782	0.52	-1.1
1,980,252	-		MIT1002_01782	0.53	-0.9
1,980,286	+		MIT1002_01782	0.55	+0.6
1,980,286	+		MIT1002_01782	0.55	+0.9
1,980,286	+		MIT1002_01782	0.55	+0.6
1,980,294	-		MIT1002_01782	0.55	-3.3
1,980,323	-		MIT1002_01782	0.56	+0.5
1,980,323	-		MIT1002_01782	0.56	-0.5
1,980,323	-		MIT1002_01782	0.56	-0.1
1,980,341	-		MIT1002_01782	0.57	+0.9
1,980,356	+		MIT1002_01782	0.57	-1.4
1,980,439	+		MIT1002_01782	0.61	+1.6
1,980,440	+		MIT1002_01782	0.61	+0.7
1,980,478	+		MIT1002_01782	0.62	-0.8
1,980,494	-		MIT1002_01782	0.63	+0.9
1,980,516	+		MIT1002_01782	0.63	-0.9
1,980,542	+		MIT1002_01782	0.65	-0.6
1,980,545	-		MIT1002_01782	0.65	-0.6
1,980,609	+		MIT1002_01782	0.67	-0.8
1,980,679	+		MIT1002_01782	0.70	-2.6
1,980,724	-		MIT1002_01782	0.72	-0.9
1,980,764	+		MIT1002_01782	0.73	+0.2
1,980,773	+		MIT1002_01782	0.73	-4.5
1,980,781	-		MIT1002_01782	0.74	+0.7
1,980,781	-		MIT1002_01782	0.74	-0.7
1,980,783	+		MIT1002_01782	0.74	-1.8
1,980,786	-		MIT1002_01782	0.74	-0.5
1,980,786	-		MIT1002_01782	0.74	+0.1
1,980,786	-		MIT1002_01782	0.74	+0.7
1,980,807	-		MIT1002_01782	0.75	-0.5
1,980,865	+		MIT1002_01782	0.77	+0.2
1,980,903	-		MIT1002_01782	0.78	-1.6
1,980,903	-		MIT1002_01782	0.78	+0.7
1,980,909	+		MIT1002_01782	0.79	+0.1
1,980,917	-		MIT1002_01782	0.79	+0.0
1,980,942	-		MIT1002_01782	0.80	+1.6
1,980,945	+		MIT1002_01782	0.80	+0.2
1,980,953	-		MIT1002_01782	0.80	-0.5
1,981,020	+		MIT1002_01782	0.83	+0.8
1,981,025	+		MIT1002_01782	0.83	-0.5
1,981,025	+		MIT1002_01782	0.83	+0.2
1,981,096	+		MIT1002_01782	0.86	+0.0
1,981,235	+				-0.0
1,981,257	-				+0.3
1,981,260	-				-1.2
1,981,349	+				-0.9
1,981,357	-				-1.6
1,981,424	+				+1.8
1,981,607	+				+0.6
1,981,616	-				+0.2
1,981,741	-				-1.4
1,981,787	+				+0.3
1,981,805	-				+0.6
1,981,950	+				+0.4
1,981,952	-				-0.2
1,981,958	-				+0.2
1,981,999	-				-0.5
1,982,214	+				-2.1
1,982,296	+				-0.6
1,982,324	+				+0.4
1,982,371	-		MIT1002_01783	0.13	-0.3
1,982,371	-		MIT1002_01783	0.13	+1.2
1,982,404	+		MIT1002_01783	0.16	+0.5
1,982,404	+		MIT1002_01783	0.16	-3.2
1,982,411	+		MIT1002_01783	0.16	-2.2