Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01675

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
1,851,474	+		MIT1002_01674	0.33	+0.3
1,851,480	+		MIT1002_01674	0.33	+1.0
1,851,494	+		MIT1002_01674	0.34	+0.2
1,851,502	-		MIT1002_01674	0.35	-0.6
1,851,504	+		MIT1002_01674	0.35	-0.1
1,851,586	+		MIT1002_01674	0.41	-4.7
1,851,630	+		MIT1002_01674	0.44	+0.1
1,851,676	+		MIT1002_01674	0.47	+1.2
1,851,743	+		MIT1002_01674	0.52	+0.3
1,851,779	+		MIT1002_01674	0.55	+2.6
1,851,779	+		MIT1002_01674	0.55	-0.4
1,851,913	+		MIT1002_01674	0.64	-2.0
1,851,913	+		MIT1002_01674	0.64	+1.8
1,851,944	-		MIT1002_01674	0.67	-2.8
1,851,957	+		MIT1002_01674	0.68	+0.6
1,852,273	+				+0.7
1,852,292	+				+1.3
1,852,292	+				-2.4
1,852,346	-				-0.0
1,852,358	+				+0.1
1,852,361	+				+2.3
1,852,361	+				+0.6
1,852,363	+				-0.6
1,852,371	-				-0.9
1,852,382	+				+1.1
1,852,382	+				-1.5
1,852,382	+				+0.0
1,852,382	+				+0.4
1,852,390	-				+0.0
1,852,442	+				+0.8
1,852,451	-				-1.1
1,852,485	+				+1.1
1,852,565	+				+0.8
1,852,637	-		MIT1002_01675	0.12	-2.7
1,852,673	-		MIT1002_01675	0.15	-0.2
1,852,675	+		MIT1002_01675	0.15	+2.3
1,852,717	+		MIT1002_01675	0.17	-3.2
1,852,720	-		MIT1002_01675	0.17	-0.0
1,852,802	+		MIT1002_01675	0.22	-1.3
1,852,847	-		MIT1002_01675	0.25	-1.9
1,852,847	-		MIT1002_01675	0.25	-1.4
1,852,909	+		MIT1002_01675	0.29	+1.0
1,852,909	+		MIT1002_01675	0.29	+0.5
1,852,962	+		MIT1002_01675	0.32	-0.5
1,853,033	+		MIT1002_01675	0.36	+0.9
1,853,254	-		MIT1002_01675	0.50	+0.8
1,853,258	+		MIT1002_01675	0.50	+0.4
1,853,259	-		MIT1002_01675	0.50	+0.7
1,853,259	-		MIT1002_01675	0.50	+1.2
1,853,259	-		MIT1002_01675	0.50	+0.1
1,853,358	+		MIT1002_01675	0.56	-2.9
1,853,366	+		MIT1002_01675	0.56	+0.4
1,853,374	-		MIT1002_01675	0.57	+1.2
1,853,456	+		MIT1002_01675	0.62	+0.6
1,853,459	-		MIT1002_01675	0.62	-2.1
1,853,475	-		MIT1002_01675	0.63	-0.6
1,853,477	+		MIT1002_01675	0.63	+1.3
1,853,477	+		MIT1002_01675	0.63	-0.3
1,853,477	+		MIT1002_01675	0.63	+0.8
1,853,485	-		MIT1002_01675	0.64	+0.7
1,853,490	-		MIT1002_01675	0.64	+0.2
1,853,546	-		MIT1002_01675	0.67	-2.5
1,853,555	-		MIT1002_01675	0.68	+1.1
1,853,623	+		MIT1002_01675	0.72	+2.3
1,853,623	+		MIT1002_01675	0.72	-3.4
1,853,631	-		MIT1002_01675	0.72	-1.8
1,853,656	-		MIT1002_01675	0.74	+0.7
1,853,658	+		MIT1002_01675	0.74	-0.3
1,853,666	-		MIT1002_01675	0.75	-1.0
1,853,666	-		MIT1002_01675	0.75	-0.2
1,853,709	-		MIT1002_01675	0.77	-0.1
1,853,754	-		MIT1002_01675	0.80	+0.1
1,853,786	-		MIT1002_01675	0.82	-2.1
1,853,790	+		MIT1002_01675	0.82	+0.2
1,853,790	+		MIT1002_01675	0.82	-0.0
1,853,790	+		MIT1002_01675	0.82	+1.0
1,853,793	-		MIT1002_01675	0.82	-1.6
1,853,798	-		MIT1002_01675	0.83	+0.7
1,853,808	-		MIT1002_01675	0.83	-0.3
1,853,819	-		MIT1002_01675	0.84	+0.2
1,853,858	+		MIT1002_01675	0.86	+0.9
1,853,881	-		MIT1002_01675	0.88	+2.2
1,853,936	-				-1.8
1,853,978	-				-0.2
1,854,117	-				+0.4
1,854,143	+				-2.4
1,854,153	+				+0.8
1,854,158	-				+1.2
1,854,197	-				+0.7
1,854,559	-		MIT1002_01676	0.24	-3.3