Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01230

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
1,353,104	+				+0.3
1,353,110	+				+1.7
1,353,133	-				-2.3
1,353,187	-				-0.6
1,353,187	-				-0.4
1,353,244	+				+0.6
1,353,244	+				+0.1
1,353,285	+				-0.2
1,353,295	+				-1.9
1,353,303	-				+0.6
1,353,329	-				+0.3
1,353,388	-				-1.2
1,353,455	+		MIT1002_01230	0.14	-0.6
1,353,479	-		MIT1002_01230	0.16	+1.6
1,353,479	-		MIT1002_01230	0.16	+0.5
1,353,505	-		MIT1002_01230	0.18	+0.8
1,353,553	+		MIT1002_01230	0.22	+0.7
1,353,595	-		MIT1002_01230	0.26	-3.2
1,353,630	+		MIT1002_01230	0.28	+0.3
1,353,656	-		MIT1002_01230	0.31	-0.2
1,353,739	-		MIT1002_01230	0.37	+0.4
1,353,751	-		MIT1002_01230	0.38	+0.6
1,353,758	+		MIT1002_01230	0.39	-0.3
1,353,770	+		MIT1002_01230	0.40	+0.1
1,353,843	+		MIT1002_01230	0.46	+1.1
1,353,858	+		MIT1002_01230	0.47	+0.2
1,353,866	-		MIT1002_01230	0.48	-0.0
1,354,026	+		MIT1002_01230	0.61	-0.9
1,354,039	-		MIT1002_01230	0.62	-1.7
1,354,168	-		MIT1002_01230	0.73	+0.4
1,354,188	+		MIT1002_01230	0.74	+0.6
1,354,196	+		MIT1002_01230	0.75	-3.2
1,354,196	-		MIT1002_01230	0.75	-3.8
1,354,204	-		MIT1002_01230	0.76	-1.1
1,354,204	-		MIT1002_01230	0.76	-2.7
1,354,243	+		MIT1002_01230	0.79	-0.6
1,354,250	+		MIT1002_01230	0.79	+0.2
1,354,305	-		MIT1002_01230	0.84	-2.9
1,354,318	+		MIT1002_01230	0.85	+0.2
1,354,318	+		MIT1002_01230	0.85	-1.2
1,354,318	+		MIT1002_01230	0.85	-2.8
1,354,326	-		MIT1002_01230	0.86	-1.4
1,354,335	-		MIT1002_01230	0.86	+0.4
1,354,362	+		MIT1002_01230	0.89	-0.1
1,354,370	-		MIT1002_01230	0.89	-0.9
1,354,408	-				+0.6
1,354,411	+				-0.7
1,354,495	+				+1.5
1,354,540	-				-1.3
1,354,545	+				-0.7
1,354,564	+				+0.2
1,354,589	-				+0.4
1,354,668	-				-2.5
1,354,760	+		MIT1002_01231	0.15	-1.1
1,354,817	+		MIT1002_01231	0.19	+0.2
1,354,818	-		MIT1002_01231	0.19	-0.2
1,354,849	+		MIT1002_01231	0.21	-1.1
1,354,849	+		MIT1002_01231	0.21	+0.1
1,354,860	+		MIT1002_01231	0.21	+2.3
1,354,947	+		MIT1002_01231	0.27	+1.0
1,354,955	-		MIT1002_01231	0.28	+0.8
1,354,999	-		MIT1002_01231	0.30	-1.5
1,355,045	+		MIT1002_01231	0.33	-1.6
1,355,053	-		MIT1002_01231	0.34	-4.2
1,355,053	-		MIT1002_01231	0.34	+0.4
1,355,079	+		MIT1002_01231	0.36	-0.9
1,355,084	+		MIT1002_01231	0.36	+0.3
1,355,084	+		MIT1002_01231	0.36	-3.2
1,355,084	+		MIT1002_01231	0.36	+1.2
1,355,092	-		MIT1002_01231	0.36	-0.6
1,355,092	-		MIT1002_01231	0.36	+1.6
1,355,092	-		MIT1002_01231	0.36	+0.1
1,355,092	-		MIT1002_01231	0.36	-1.6
1,355,150	+		MIT1002_01231	0.40	+0.6
1,355,187	-		MIT1002_01231	0.43	-1.4
1,355,191	+		MIT1002_01231	0.43	-0.0
1,355,388	+		MIT1002_01231	0.55	-0.7
1,355,388	+		MIT1002_01231	0.55	-0.4
1,355,429	+		MIT1002_01231	0.58	-2.2
1,355,454	-		MIT1002_01231	0.60	-3.5