Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01053

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
1,162,537	+				-2.6
1,162,545	-				-0.3
1,162,547	+				+0.2
1,162,555	-				-0.2
1,162,555	-				+1.7
1,162,581	+				+0.5
1,162,581	+				+1.2
1,162,589	-				-1.1
1,162,598	+				+0.4
1,162,714	-		MIT1002_01052	0.26	+0.9
1,162,737	+		MIT1002_01052	0.29	-2.5
1,162,737	+		MIT1002_01052	0.29	-1.3
1,162,745	-		MIT1002_01052	0.31	+0.8
1,162,814	+		MIT1002_01052	0.42	+0.5
1,162,835	-		MIT1002_01052	0.45	+0.4
1,162,870	+		MIT1002_01052	0.51	-0.0
1,162,870	+		MIT1002_01052	0.51	-2.1
1,162,878	-		MIT1002_01052	0.52	-0.6
1,162,913	+		MIT1002_01052	0.58	-1.4
1,162,964	-		MIT1002_01052	0.66	-0.8
1,162,986	-		MIT1002_01052	0.70	+0.1
1,162,989	+		MIT1002_01052	0.70	+0.6
1,163,090	+		MIT1002_01052	0.86	-2.3
1,163,090	+		MIT1002_01052	0.86	+1.7
1,163,098	-		MIT1002_01052	0.88	+0.3
1,163,098	-		MIT1002_01052	0.88	-2.0
1,163,124	-				+1.4
1,163,174	+				+0.5
1,163,197	+				-0.4
1,163,235	-				+2.1
1,163,245	+				-0.0
1,163,245	+				-1.1
1,163,250	+				+0.5
1,163,253	-				-0.2
1,163,253	-				+0.1
1,163,278	+				-0.0
1,163,390	-				+0.8
1,163,472	-				-0.1
1,163,483	-				-2.3
1,163,483	-				+0.7
1,163,484	+				+2.0
1,163,505	+				+0.0
1,163,595	+				+1.3
1,163,595	+				-2.8
1,163,595	+				+0.1
1,163,595	+				-0.1
1,163,603	-				-1.4
1,163,603	-				-0.1
1,163,603	-				+0.7
1,163,603	-				-0.0
1,163,603	-				-2.2
1,163,603	-				+1.7
1,163,603	-				+1.5
1,163,629	+				+0.3
1,163,637	-		MIT1002_01053	0.10	-0.6
1,163,670	+		MIT1002_01053	0.14	+0.7
1,163,722	-		MIT1002_01053	0.19	-0.1
1,163,850	-		MIT1002_01053	0.32	+0.7
1,163,852	+		MIT1002_01053	0.32	+2.0
1,163,860	-		MIT1002_01053	0.33	+1.1
1,163,937	-		MIT1002_01053	0.41	+0.7
1,164,395	-		MIT1002_01053	0.88	-0.4
1,164,451	+				+0.6
1,164,463	-				+0.6
1,164,547	+				-0.3
1,164,547	+				-0.6
1,164,547	+				+1.0
1,164,547	+				-0.0
1,164,547	+				+0.4
1,164,555	-				+1.6
1,164,555	-				+0.2
1,164,555	-				+0.7
1,164,569	+				+0.5
1,164,577	-				-0.3
1,164,611	-				+0.6
1,164,760	-				-3.7
1,164,966	+				+0.6
1,164,971	+				+0.2
1,164,974	+				-0.6
1,165,019	+				-0.3
1,165,055	-				-0.3
1,165,113	+				-0.1
1,165,113	+				-1.5
1,165,121	-		MIT1002_01054	0.11	+1.0
1,165,121	-		MIT1002_01054	0.11	-2.0
1,165,124	+		MIT1002_01054	0.11	-1.0
1,165,202	-		MIT1002_01054	0.19	-2.0
1,165,241	-		MIT1002_01054	0.23	+1.1
1,165,304	-		MIT1002_01054	0.30	+0.6
1,165,368	-		MIT1002_01054	0.36	-3.1
1,165,381	+		MIT1002_01054	0.38	+0.6