Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00970

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
1,075,447	-		MIT1002_00969	0.15	+1.7
1,075,448	+		MIT1002_00969	0.15	-0.6
1,075,448	+		MIT1002_00969	0.15	-0.6
1,075,456	-		MIT1002_00969	0.16	-1.6
1,075,456	-		MIT1002_00969	0.16	+1.4
1,075,456	-		MIT1002_00969	0.16	-2.3
1,075,456	-		MIT1002_00969	0.16	+0.4
1,075,456	-		MIT1002_00969	0.16	-1.0
1,075,511	+		MIT1002_00969	0.22	+1.1
1,075,518	-		MIT1002_00969	0.23	-0.6
1,075,524	+		MIT1002_00969	0.23	+0.5
1,075,554	+		MIT1002_00969	0.27	+1.4
1,075,562	-		MIT1002_00969	0.27	+0.9
1,075,573	+		MIT1002_00969	0.29	-1.0
1,075,595	+		MIT1002_00969	0.31	-0.5
1,075,595	+		MIT1002_00969	0.31	+0.2
1,075,595	+		MIT1002_00969	0.31	-1.2
1,075,603	-		MIT1002_00969	0.32	+0.4
1,075,603	-		MIT1002_00969	0.32	+0.6
1,075,683	+		MIT1002_00969	0.40	-1.3
1,075,745	-		MIT1002_00969	0.47	-0.0
1,075,752	+		MIT1002_00969	0.48	-0.5
1,075,889	+		MIT1002_00969	0.62	-0.7
1,075,969	-		MIT1002_00969	0.70	+1.3
1,076,432	+				-0.6
1,076,432	+				+0.3
1,076,440	-				+0.2
1,076,487	-				-2.2
1,076,545	+		MIT1002_00970	0.12	-0.1
1,076,553	-		MIT1002_00970	0.12	-1.3
1,076,553	-		MIT1002_00970	0.12	+0.8
1,076,587	-		MIT1002_00970	0.16	-2.5
1,076,587	-		MIT1002_00970	0.16	-1.8
1,076,592	+		MIT1002_00970	0.16	-1.3
1,076,592	-		MIT1002_00970	0.16	-0.1
1,076,644	+		MIT1002_00970	0.21	-2.9
1,076,649	+		MIT1002_00970	0.22	-2.3
1,076,649	+		MIT1002_00970	0.22	-2.1
1,076,649	+		MIT1002_00970	0.22	-1.1
1,076,652	-		MIT1002_00970	0.22	-2.5
1,076,652	-		MIT1002_00970	0.22	-1.1
1,076,656	+		MIT1002_00970	0.22	-1.8
1,076,657	-		MIT1002_00970	0.22	-3.1
1,076,657	-		MIT1002_00970	0.22	-1.8
1,076,657	-		MIT1002_00970	0.22	-2.6
1,076,657	-		MIT1002_00970	0.22	-3.3
1,076,657	-		MIT1002_00970	0.22	-1.3
1,076,657	-		MIT1002_00970	0.22	-3.1
1,076,657	-		MIT1002_00970	0.22	-1.5
1,076,657	-		MIT1002_00970	0.22	+0.6
1,076,715	+		MIT1002_00970	0.28	+1.0
1,076,759	+		MIT1002_00970	0.32	-1.0
1,076,815	-		MIT1002_00970	0.38	-0.3
1,076,815	-		MIT1002_00970	0.38	-5.0
1,076,843	+		MIT1002_00970	0.41	-0.7
1,076,844	-		MIT1002_00970	0.41	-1.6
1,076,851	-		MIT1002_00970	0.41	-2.5
1,076,851	-		MIT1002_00970	0.41	-1.3
1,076,853	+		MIT1002_00970	0.42	-0.4
1,076,908	+		MIT1002_00970	0.47	-2.3
1,076,942	-		MIT1002_00970	0.50	-2.5
1,076,953	+		MIT1002_00970	0.51	-1.6
1,076,988	-		MIT1002_00970	0.55	-3.2
1,077,006	-		MIT1002_00970	0.57	-3.2
1,077,006	-		MIT1002_00970	0.57	-4.5
1,077,084	+		MIT1002_00970	0.64	-5.4
1,077,087	-		MIT1002_00970	0.65	+1.4
1,077,118	+		MIT1002_00970	0.68	+0.0
1,077,118	+		MIT1002_00970	0.68	-1.6
1,077,118	+		MIT1002_00970	0.68	-5.1
1,077,126	-		MIT1002_00970	0.68	-2.4
1,077,126	-		MIT1002_00970	0.68	+1.3
1,077,126	-		MIT1002_00970	0.68	-4.0
1,077,136	-		MIT1002_00970	0.69	-1.4
1,077,147	-		MIT1002_00970	0.70	-1.0
1,077,167	-		MIT1002_00970	0.72	-0.6
1,077,194	+		MIT1002_00970	0.75	-2.2
1,077,354	+				-3.2
1,077,370	-				+0.0
1,077,432	+				-2.3
1,077,481	+		MIT1002_00971	0.12	-3.0
1,077,551	+		MIT1002_00971	0.35	-1.1
1,077,559	-		MIT1002_00971	0.37	+1.9
1,077,625	-		MIT1002_00971	0.59	+0.5
1,077,687	-		MIT1002_00971	0.80	+0.7
1,077,691	+		MIT1002_00971	0.81	-0.3
1,077,693	+		MIT1002_00971	0.82	+0.0
1,077,722	+				+1.0
1,077,908	-				-1.6
1,078,009	+		MIT1002_00972	0.11	+1.4
1,078,035	-		MIT1002_00972	0.12	-0.3
1,078,095	+		MIT1002_00972	0.16	-0.4
1,078,100	+		MIT1002_00972	0.17	-1.1
1,078,111	-		MIT1002_00972	0.17	+0.0
1,078,124	+		MIT1002_00972	0.18	+0.4
1,078,130	-		MIT1002_00972	0.18	+2.0
1,078,130	-		MIT1002_00972	0.18	-1.1
1,078,132	-		MIT1002_00972	0.19	+1.4
1,078,284	-		MIT1002_00972	0.29	-0.0
1,078,376	+		MIT1002_00972	0.35	-2.5
1,078,429	+		MIT1002_00972	0.38	+0.8
1,078,437	-		MIT1002_00972	0.39	+1.6
1,078,437	-		MIT1002_00972	0.39	+1.6
1,078,442	-		MIT1002_00972	0.39	-0.3
1,078,442	-		MIT1002_00972	0.39	-1.5