Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00921

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
1,021,498	+		MIT1002_00920	0.64	-0.7
1,021,506	-		MIT1002_00920	0.64	-0.0
1,021,515	+		MIT1002_00920	0.65	+0.9
1,021,541	+		MIT1002_00920	0.66	+0.6
1,021,736	-		MIT1002_00920	0.73	+1.4
1,021,742	-		MIT1002_00920	0.73	+2.0
1,021,753	+		MIT1002_00920	0.73	-1.1
1,021,758	+		MIT1002_00920	0.74	+0.2
1,021,761	-		MIT1002_00920	0.74	+0.8
1,021,761	-		MIT1002_00920	0.74	-0.5
1,021,761	-		MIT1002_00920	0.74	-0.4
1,021,761	-		MIT1002_00920	0.74	+0.4
1,021,771	-		MIT1002_00920	0.74	-3.0
1,021,772	+		MIT1002_00920	0.74	+0.3
1,021,817	-		MIT1002_00920	0.76	+0.2
1,021,865	+		MIT1002_00920	0.78	-1.0
1,021,865	+		MIT1002_00920	0.78	+2.1
1,021,870	+		MIT1002_00920	0.78	-2.0
1,021,873	-		MIT1002_00920	0.78	+0.7
1,021,873	-		MIT1002_00920	0.78	-1.7
1,021,873	-		MIT1002_00920	0.78	+0.7
1,021,889	+		MIT1002_00920	0.78	+1.9
1,022,011	+		MIT1002_00920	0.83	-1.2
1,022,131	+		MIT1002_00920	0.87	-0.1
1,022,243	+				+0.9
1,022,254	+				+0.9
1,022,254	+				+1.3
1,022,254	+				+0.4
1,022,292	+				-2.0
1,022,374	+				+0.5
1,022,374	+				-0.1
1,022,416	+				+0.5
1,022,458	-				+0.1
1,022,472	+				+0.7
1,022,480	-				-0.5
1,022,495	+				-1.3
1,022,563	+				-0.9
1,022,583	+				+0.7
1,022,583	+				-0.5
1,022,591	-				+0.5
1,022,591	-				+0.5
1,022,617	+		MIT1002_00921	0.12	+2.3
1,022,684	+		MIT1002_00921	0.18	+1.2
1,022,716	-		MIT1002_00921	0.21	+1.3
1,022,743	+		MIT1002_00921	0.23	-1.4
1,022,773	-		MIT1002_00921	0.26	-0.8
1,022,827	+		MIT1002_00921	0.31	+0.2
1,022,872	+		MIT1002_00921	0.35	-2.0
1,022,900	+		MIT1002_00921	0.37	-0.0
1,022,943	+		MIT1002_00921	0.41	-0.3
1,023,004	-		MIT1002_00921	0.47	+1.9
1,023,013	+		MIT1002_00921	0.47	+0.8
1,023,024	+		MIT1002_00921	0.48	+2.3
1,023,032	-		MIT1002_00921	0.49	+1.7
1,023,075	-		MIT1002_00921	0.53	+2.8
1,023,100	-		MIT1002_00921	0.55	+2.9
1,023,103	-		MIT1002_00921	0.55	-0.8
1,023,142	-		MIT1002_00921	0.59	+2.2
1,023,152	-		MIT1002_00921	0.60	-0.5
1,023,179	-		MIT1002_00921	0.62	-1.2
1,023,314	+		MIT1002_00921	0.74	+0.8
1,023,324	+		MIT1002_00921	0.75	+1.1
1,023,367	+		MIT1002_00921	0.79	-1.0
1,023,375	+		MIT1002_00921	0.80	-1.8
1,023,389	+		MIT1002_00921	0.81	+2.8
1,023,395	+		MIT1002_00921	0.81	+1.0
1,023,403	-		MIT1002_00921	0.82	-0.8
1,023,408	-		MIT1002_00921	0.83	+2.6
1,023,416	+		MIT1002_00921	0.83	+0.3
1,023,424	-		MIT1002_00921	0.84	+1.1
1,023,483	+		MIT1002_00921	0.89	-2.4
1,023,483	+		MIT1002_00921	0.89	+0.6
1,023,491	-				+1.4
1,023,491	-				+1.5
1,023,491	-				+0.1
1,023,491	-				-0.3
1,023,491	-				-2.1
1,023,491	-				+0.5
1,023,522	-				-2.0
1,023,564	+				+1.1
1,023,653	-				-0.1
1,023,689	-				+0.9
1,023,689	-				+0.1
1,023,726	-				-1.3
1,023,726	-				-0.3
1,023,726	-				+2.0
1,023,726	-				+0.4
1,023,755	+				-0.2
1,023,800	-				+0.4
1,023,883	-				-0.3
1,023,917	+				+1.9
1,023,988	+				+1.8
1,023,993	+				+0.6
1,023,996	-				-1.3
1,024,001	-				-0.8
1,024,001	-				+0.5
1,024,001	-				-1.7
1,024,005	+				+1.4
1,024,037	-				+1.5
1,024,108	+		MIT1002_00922	0.35	-1.2
1,024,116	+		MIT1002_00922	0.41	-1.6
1,024,116	+		MIT1002_00922	0.41	-0.0
1,024,162	+		MIT1002_00922	0.74	+2.4
1,024,192	-				-0.3
1,024,197	-				-2.2
1,024,197	-				-1.0
1,024,202	-				+1.2
1,024,211	+				-0.3
1,024,219	-				+0.2
1,024,250	+				+1.6
1,024,364	+		MIT1002_00923	0.16	+1.0
1,024,372	+		MIT1002_00923	0.17	+0.4
1,024,499	+		MIT1002_00923	0.28	-0.7
1,024,573	-		MIT1002_00923	0.34	-0.9
1,024,577	+		MIT1002_00923	0.34	+1.4