Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00042

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
46,903	+		MIT1002_00041	0.35	-0.9
46,909	-		MIT1002_00041	0.35	+1.1
46,941	-		MIT1002_00041	0.37	+0.5
46,988	-		MIT1002_00041	0.40	-2.0
47,042	+		MIT1002_00041	0.44	-0.4
47,047	-		MIT1002_00041	0.44	-0.4
47,048	-		MIT1002_00041	0.44	+1.2
47,079	+		MIT1002_00041	0.46	-0.6
47,105	+		MIT1002_00041	0.48	+1.5
47,105	+		MIT1002_00041	0.48	-1.4
47,113	-		MIT1002_00041	0.49	-0.4
47,113	-		MIT1002_00041	0.49	-1.3
47,139	-		MIT1002_00041	0.50	-1.6
47,140	+		MIT1002_00041	0.51	-1.1
47,150	+		MIT1002_00041	0.51	+0.8
47,165	-		MIT1002_00041	0.52	-0.2
47,215	-		MIT1002_00041	0.56	-3.2
47,220	-		MIT1002_00041	0.56	+1.7
47,227	+		MIT1002_00041	0.56	-2.9
47,232	+		MIT1002_00041	0.57	-1.7
47,240	-		MIT1002_00041	0.57	+1.6
47,240	-		MIT1002_00041	0.57	-0.5
47,240	-		MIT1002_00041	0.57	-1.0
47,265	-		MIT1002_00041	0.59	-0.4
47,297	-		MIT1002_00041	0.61	-1.0
47,386	-		MIT1002_00041	0.67	+1.6
47,435	+		MIT1002_00041	0.70	-0.8
47,443	-		MIT1002_00041	0.71	-1.1
47,490	+		MIT1002_00041	0.74	+1.1
47,560	-		MIT1002_00041	0.79	+0.3
47,560	-		MIT1002_00041	0.79	+1.0
47,566	+		MIT1002_00041	0.79	+0.5
47,613	+		MIT1002_00041	0.82	+0.7
47,642	+		MIT1002_00041	0.84	+1.2
47,655	-		MIT1002_00041	0.85	-0.8
47,698	-		MIT1002_00041	0.88	+1.2
47,698	-		MIT1002_00041	0.88	-1.3
47,720	+		MIT1002_00041	0.90	+1.5
47,720	+		MIT1002_00041	0.90	-0.3
47,720	+		MIT1002_00041	0.90	+1.3
47,725	+		MIT1002_00041	0.90	+0.0
47,728	-				+0.9
47,728	-				+0.9
47,738	-				-0.2
47,741	+				+0.1
47,802	-				+0.4
47,841	-				-0.2
47,841	-				-0.6
48,025	+		MIT1002_00042	0.20	+0.0
48,031	+		MIT1002_00042	0.21	-3.1
48,032	+		MIT1002_00042	0.21	-0.0
48,038	-		MIT1002_00042	0.21	+0.4
48,039	-		MIT1002_00042	0.22	+0.7
48,063	+		MIT1002_00042	0.25	-1.8
48,071	-		MIT1002_00042	0.26	+0.1
48,073	-		MIT1002_00042	0.26	+1.8
48,115	-		MIT1002_00042	0.32	+0.0
48,157	+		MIT1002_00042	0.37	-0.7
48,157	+		MIT1002_00042	0.37	+0.4
48,157	+		MIT1002_00042	0.37	-1.1
48,157	+		MIT1002_00042	0.37	+1.0
48,183	+		MIT1002_00042	0.41	-0.2
48,232	+		MIT1002_00042	0.47	-0.1
48,238	+		MIT1002_00042	0.48	+0.3
48,240	+		MIT1002_00042	0.48	+1.0
48,246	-		MIT1002_00042	0.49	-0.6
48,248	-		MIT1002_00042	0.49	-1.8
48,248	-		MIT1002_00042	0.49	-0.3
48,253	-		MIT1002_00042	0.50	-2.7
48,253	-		MIT1002_00042	0.50	-1.1
48,297	-		MIT1002_00042	0.56	+0.3
48,341	+		MIT1002_00042	0.62	-1.1
48,382	-		MIT1002_00042	0.67	-0.3
48,415	-		MIT1002_00042	0.72	-0.3
48,485	-		MIT1002_00042	0.81	-0.3
48,571	+				+0.6
48,665	-				+0.3
48,670	+				+0.6
48,678	-				+1.2
48,679	-				-1.5
48,787	-				+0.2
48,793	-				+0.0
48,811	+				+3.0
48,823	+				+0.5
48,831	-				+1.5
48,838	-				-0.1
48,848	-				+0.7
48,905	+				+0.8
48,979	+		MIT1002_00043	0.21	-0.7
49,012	-		MIT1002_00043	0.27	+0.2
49,063	-		MIT1002_00043	0.37	-1.6
49,142	+		MIT1002_00043	0.53	+0.1
49,238	-		MIT1002_00043	0.71	-0.3
49,270	-		MIT1002_00043	0.78	-0.2
49,351	+				+1.3
49,365	+				-0.1
49,391	-				-0.8
49,445	+				+1.4
49,477	+				+1.3
49,487	+				+1.6
49,487	+				+1.8
49,487	+				+1.5
49,495	-				-0.6
49,566	+		MIT1002_00044	0.10	+0.8
49,566	+		MIT1002_00044	0.10	-0.8
49,566	+		MIT1002_00044	0.10	-0.3
49,568	-		MIT1002_00044	0.10	+0.2
49,574	-		MIT1002_00044	0.11	+1.3