Experiment: Motility_outer_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS27525 and QEN71_RS27530 overlap by 80 nucleotides QEN71_RS27530 and QEN71_RS27535 are separated by 24 nucleotides QEN71_RS27535 and QEN71_RS27540 are separated by 267 nucleotides
QEN71_RS27525: QEN71_RS27525 - MltA domain-containing protein, at 6,136,994 to 6,138,226
_RS27525
QEN71_RS27530: QEN71_RS27530 - hypothetical protein, at 6,138,147 to 6,138,320
_RS27530
QEN71_RS27535: QEN71_RS27535 - Co2+/Mg2+ efflux protein ApaG, at 6,138,345 to 6,138,719
_RS27535
QEN71_RS27540: QEN71_RS27540 - ribulose-phosphate 3-epimerase, at 6,138,987 to 6,139,670
_RS27540
Position (kb)
6138
6139 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 6138.169 kb on - strand at 6138.203 kb on - strand at 6138.319 kb on - strand at 6138.319 kb on - strand at 6138.427 kb on + strand, within QEN71_RS27535 at 6138.469 kb on + strand, within QEN71_RS27535 at 6138.469 kb on + strand, within QEN71_RS27535 at 6138.469 kb on + strand, within QEN71_RS27535 at 6138.469 kb on + strand, within QEN71_RS27535 at 6138.469 kb on + strand, within QEN71_RS27535 at 6138.469 kb on + strand, within QEN71_RS27535 at 6138.469 kb on + strand, within QEN71_RS27535 at 6138.469 kb on + strand, within QEN71_RS27535 at 6138.469 kb on + strand, within QEN71_RS27535 at 6138.470 kb on - strand, within QEN71_RS27535 at 6138.470 kb on - strand, within QEN71_RS27535 at 6138.470 kb on - strand, within QEN71_RS27535 at 6138.470 kb on - strand, within QEN71_RS27535 at 6138.470 kb on - strand, within QEN71_RS27535 at 6138.470 kb on - strand, within QEN71_RS27535 at 6138.470 kb on - strand, within QEN71_RS27535 at 6138.470 kb on - strand, within QEN71_RS27535 at 6138.470 kb on - strand, within QEN71_RS27535 at 6138.478 kb on + strand, within QEN71_RS27535 at 6138.478 kb on + strand, within QEN71_RS27535 at 6138.478 kb on + strand, within QEN71_RS27535 at 6138.478 kb on + strand, within QEN71_RS27535 at 6138.479 kb on - strand, within QEN71_RS27535 at 6138.479 kb on - strand, within QEN71_RS27535 at 6138.561 kb on - strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.566 kb on + strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.567 kb on - strand, within QEN71_RS27535 at 6138.588 kb on + strand, within QEN71_RS27535 at 6138.588 kb on + strand, within QEN71_RS27535 at 6138.588 kb on + strand, within QEN71_RS27535 at 6138.589 kb on - strand, within QEN71_RS27535 at 6138.589 kb on - strand, within QEN71_RS27535 at 6138.589 kb on - strand, within QEN71_RS27535 at 6138.632 kb on - strand, within QEN71_RS27535 at 6138.643 kb on + strand, within QEN71_RS27535 at 6138.643 kb on + strand, within QEN71_RS27535 at 6138.643 kb on + strand, within QEN71_RS27535 at 6138.643 kb on + strand, within QEN71_RS27535 at 6138.644 kb on - strand, within QEN71_RS27535 at 6138.644 kb on - strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.679 kb on + strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.680 kb on - strand, within QEN71_RS27535 at 6138.893 kb on - strand at 6138.893 kb on - strand at 6138.949 kb on + strand at 6138.949 kb on + strand at 6138.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample remove 6,138,169 - +0.2 6,138,203 - -1.3 6,138,319 - +0.6 6,138,319 - -0.4 6,138,427 + QEN71_RS27535 0.22 +1.9 6,138,469 + QEN71_RS27535 0.33 -0.5 6,138,469 + QEN71_RS27535 0.33 +1.4 6,138,469 + QEN71_RS27535 0.33 -0.2 6,138,469 + QEN71_RS27535 0.33 -2.1 6,138,469 + QEN71_RS27535 0.33 -0.0 6,138,469 + QEN71_RS27535 0.33 +1.3 6,138,469 + QEN71_RS27535 0.33 +0.1 6,138,469 + QEN71_RS27535 0.33 +1.0 6,138,469 + QEN71_RS27535 0.33 -2.0 6,138,470 - QEN71_RS27535 0.33 +0.8 6,138,470 - QEN71_RS27535 0.33 +0.1 6,138,470 - QEN71_RS27535 0.33 -0.2 6,138,470 - QEN71_RS27535 0.33 +0.6 6,138,470 - QEN71_RS27535 0.33 -2.4 6,138,470 - QEN71_RS27535 0.33 +0.6 6,138,470 - QEN71_RS27535 0.33 -0.8 6,138,470 - QEN71_RS27535 0.33 -0.1 6,138,470 - QEN71_RS27535 0.33 -0.5 6,138,478 + QEN71_RS27535 0.35 +0.6 6,138,478 + QEN71_RS27535 0.35 -0.1 6,138,478 + QEN71_RS27535 0.35 -0.5 6,138,478 + QEN71_RS27535 0.35 -1.0 6,138,479 - QEN71_RS27535 0.36 -1.1 6,138,479 - QEN71_RS27535 0.36 -0.7 6,138,561 - QEN71_RS27535 0.58 -0.5 6,138,566 + QEN71_RS27535 0.59 +1.8 6,138,566 + QEN71_RS27535 0.59 -1.0 6,138,566 + QEN71_RS27535 0.59 -0.4 6,138,566 + QEN71_RS27535 0.59 -0.2 6,138,566 + QEN71_RS27535 0.59 -3.4 6,138,566 + QEN71_RS27535 0.59 -1.2 6,138,566 + QEN71_RS27535 0.59 -0.4 6,138,566 + QEN71_RS27535 0.59 -0.2 6,138,566 + QEN71_RS27535 0.59 +0.4 6,138,566 + QEN71_RS27535 0.59 -3.8 6,138,566 + QEN71_RS27535 0.59 +0.4 6,138,566 + QEN71_RS27535 0.59 +1.1 6,138,566 + QEN71_RS27535 0.59 +0.5 6,138,567 - QEN71_RS27535 0.59 -0.2 6,138,567 - QEN71_RS27535 0.59 +0.5 6,138,567 - QEN71_RS27535 0.59 +0.9 6,138,567 - QEN71_RS27535 0.59 +0.6 6,138,567 - QEN71_RS27535 0.59 -1.2 6,138,567 - QEN71_RS27535 0.59 -2.1 6,138,567 - QEN71_RS27535 0.59 -2.3 6,138,567 - QEN71_RS27535 0.59 +0.6 6,138,567 - QEN71_RS27535 0.59 +0.1 6,138,567 - QEN71_RS27535 0.59 +0.2 6,138,588 + QEN71_RS27535 0.65 -0.8 6,138,588 + QEN71_RS27535 0.65 -0.1 6,138,588 + QEN71_RS27535 0.65 -1.5 6,138,589 - QEN71_RS27535 0.65 +0.2 6,138,589 - QEN71_RS27535 0.65 -1.2 6,138,589 - QEN71_RS27535 0.65 -0.5 6,138,632 - QEN71_RS27535 0.77 -2.2 6,138,643 + QEN71_RS27535 0.79 -0.6 6,138,643 + QEN71_RS27535 0.79 -0.1 6,138,643 + QEN71_RS27535 0.79 -0.4 6,138,643 + QEN71_RS27535 0.79 +0.9 6,138,644 - QEN71_RS27535 0.80 +1.0 6,138,644 - QEN71_RS27535 0.80 +0.3 6,138,679 + QEN71_RS27535 0.89 -0.1 6,138,679 + QEN71_RS27535 0.89 -0.8 6,138,679 + QEN71_RS27535 0.89 -0.5 6,138,679 + QEN71_RS27535 0.89 -0.9 6,138,679 + QEN71_RS27535 0.89 +0.9 6,138,679 + QEN71_RS27535 0.89 -1.7 6,138,679 + QEN71_RS27535 0.89 -0.2 6,138,679 + QEN71_RS27535 0.89 +0.0 6,138,679 + QEN71_RS27535 0.89 +0.3 6,138,679 + QEN71_RS27535 0.89 -0.5 6,138,680 - QEN71_RS27535 0.89 +0.1 6,138,680 - QEN71_RS27535 0.89 -0.0 6,138,680 - QEN71_RS27535 0.89 +0.1 6,138,680 - QEN71_RS27535 0.89 +0.2 6,138,680 - QEN71_RS27535 0.89 -0.7 6,138,680 - QEN71_RS27535 0.89 -1.0 6,138,680 - QEN71_RS27535 0.89 -0.6 6,138,680 - QEN71_RS27535 0.89 +0.6 6,138,680 - QEN71_RS27535 0.89 -0.5 6,138,680 - QEN71_RS27535 0.89 +0.3 6,138,893 - +0.8 6,138,893 - -0.1 6,138,949 + +0.4 6,138,949 + -0.2 6,138,950 - -0.2
Or see this region's nucleotide sequence