Experiment: Motility_outer_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26860 and QEN71_RS26865 are separated by 5 nucleotides QEN71_RS26865 and QEN71_RS26870 are separated by 254 nucleotides QEN71_RS26870 and QEN71_RS26875 overlap by 4 nucleotides
QEN71_RS26860: QEN71_RS26860 - class II glutamine amidotransferase, at 5,991,431 to 5,992,336
_RS26860
QEN71_RS26865: QEN71_RS26865 - hypothetical protein, at 5,992,342 to 5,992,791
_RS26865
QEN71_RS26870: QEN71_RS26870 - amino acid ABC transporter ATP-binding protein, at 5,993,046 to 5,993,771
_RS26870
QEN71_RS26875: QEN71_RS26875 - glutamate/aspartate ABC transporter permease GltK, at 5,993,768 to 5,994,445
_RS26875
Position (kb) 5992
5993 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5991.342 kb on - strand at 5991.342 kb on - strand at 5991.342 kb on - strand at 5991.342 kb on - strand at 5991.342 kb on - strand at 5991.342 kb on - strand at 5991.342 kb on - strand at 5991.342 kb on - strand at 5991.342 kb on - strand at 5991.342 kb on - strand at 5991.363 kb on + strand at 5991.364 kb on - strand at 5991.364 kb on - strand at 5991.364 kb on - strand at 5991.401 kb on - strand at 5991.401 kb on - strand at 5991.441 kb on + strand at 5991.441 kb on + strand at 5991.441 kb on + strand at 5991.441 kb on + strand at 5991.441 kb on + strand at 5991.441 kb on + strand at 5991.441 kb on + strand at 5991.442 kb on - strand at 5991.442 kb on - strand at 5991.442 kb on - strand at 5991.629 kb on + strand, within QEN71_RS26860 at 5991.661 kb on + strand, within QEN71_RS26860 at 5991.668 kb on - strand, within QEN71_RS26860 at 5991.685 kb on + strand, within QEN71_RS26860 at 5991.685 kb on + strand, within QEN71_RS26860 at 5991.685 kb on + strand, within QEN71_RS26860 at 5991.685 kb on + strand, within QEN71_RS26860 at 5991.685 kb on + strand, within QEN71_RS26860 at 5991.686 kb on - strand, within QEN71_RS26860 at 5991.686 kb on - strand, within QEN71_RS26860 at 5991.686 kb on - strand, within QEN71_RS26860 at 5991.686 kb on - strand, within QEN71_RS26860 at 5991.686 kb on - strand, within QEN71_RS26860 at 5991.686 kb on - strand, within QEN71_RS26860 at 5991.686 kb on - strand, within QEN71_RS26860 at 5991.770 kb on + strand, within QEN71_RS26860 at 5991.770 kb on + strand, within QEN71_RS26860 at 5991.770 kb on + strand, within QEN71_RS26860 at 5991.770 kb on + strand, within QEN71_RS26860 at 5991.771 kb on - strand, within QEN71_RS26860 at 5991.771 kb on - strand, within QEN71_RS26860 at 5991.771 kb on - strand, within QEN71_RS26860 at 5991.771 kb on - strand, within QEN71_RS26860 at 5991.794 kb on + strand, within QEN71_RS26860 at 5991.794 kb on + strand, within QEN71_RS26860 at 5991.795 kb on - strand, within QEN71_RS26860 at 5991.795 kb on - strand, within QEN71_RS26860 at 5991.795 kb on - strand, within QEN71_RS26860 at 5992.004 kb on + strand, within QEN71_RS26860 at 5992.004 kb on + strand, within QEN71_RS26860 at 5992.004 kb on + strand, within QEN71_RS26860 at 5992.004 kb on + strand, within QEN71_RS26860 at 5992.004 kb on + strand, within QEN71_RS26860 at 5992.004 kb on + strand, within QEN71_RS26860 at 5992.005 kb on - strand, within QEN71_RS26860 at 5992.076 kb on + strand, within QEN71_RS26860 at 5992.325 kb on + strand at 5992.326 kb on - strand at 5992.343 kb on + strand at 5992.344 kb on - strand at 5992.344 kb on - strand at 5992.455 kb on + strand, within QEN71_RS26865 at 5992.455 kb on + strand, within QEN71_RS26865 at 5992.455 kb on + strand, within QEN71_RS26865 at 5992.455 kb on + strand, within QEN71_RS26865 at 5992.455 kb on + strand, within QEN71_RS26865 at 5992.455 kb on + strand, within QEN71_RS26865 at 5992.455 kb on + strand, within QEN71_RS26865 at 5992.456 kb on - strand, within QEN71_RS26865 at 5992.456 kb on - strand, within QEN71_RS26865 at 5992.456 kb on - strand, within QEN71_RS26865 at 5992.524 kb on - strand, within QEN71_RS26865 at 5992.539 kb on + strand, within QEN71_RS26865 at 5992.558 kb on + strand, within QEN71_RS26865 at 5992.559 kb on - strand, within QEN71_RS26865 at 5992.559 kb on - strand, within QEN71_RS26865 at 5992.559 kb on - strand, within QEN71_RS26865 at 5992.662 kb on + strand, within QEN71_RS26865 at 5992.665 kb on + strand, within QEN71_RS26865 at 5992.666 kb on - strand, within QEN71_RS26865 at 5992.666 kb on - strand, within QEN71_RS26865 at 5992.666 kb on - strand, within QEN71_RS26865 at 5992.674 kb on - strand, within QEN71_RS26865 at 5992.674 kb on - strand, within QEN71_RS26865 at 5992.867 kb on + strand at 5992.867 kb on + strand at 5992.867 kb on + strand at 5992.867 kb on + strand at 5992.881 kb on + strand at 5992.923 kb on - strand at 5992.956 kb on + strand at 5992.956 kb on + strand at 5992.956 kb on + strand at 5992.956 kb on + strand at 5992.956 kb on + strand at 5992.957 kb on - strand at 5992.957 kb on - strand at 5992.957 kb on - strand at 5992.957 kb on - strand at 5992.957 kb on - strand at 5993.041 kb on + strand at 5993.041 kb on + strand at 5993.042 kb on - strand at 5993.042 kb on - strand at 5993.042 kb on - strand at 5993.295 kb on + strand, within QEN71_RS26870 at 5993.296 kb on - strand, within QEN71_RS26870 at 5993.296 kb on - strand, within QEN71_RS26870 at 5993.296 kb on - strand, within QEN71_RS26870 at 5993.296 kb on - strand, within QEN71_RS26870 at 5993.374 kb on + strand, within QEN71_RS26870 at 5993.741 kb on - strand at 5993.762 kb on + strand at 5993.762 kb on + strand at 5993.762 kb on + strand at 5993.763 kb on - strand at 5993.763 kb on - strand at 5993.763 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample remove 5,991,342 - +0.7 5,991,342 - -0.6 5,991,342 - -0.4 5,991,342 - -1.1 5,991,342 - -2.9 5,991,342 - +0.4 5,991,342 - -0.9 5,991,342 - -0.4 5,991,342 - -2.0 5,991,342 - +0.5 5,991,363 + -0.6 5,991,364 - -0.0 5,991,364 - -2.5 5,991,364 - +0.3 5,991,401 - +2.1 5,991,401 - -0.2 5,991,441 + -0.9 5,991,441 + -1.7 5,991,441 + -0.1 5,991,441 + -0.7 5,991,441 + +0.2 5,991,441 + +0.0 5,991,441 + -0.0 5,991,442 - -0.5 5,991,442 - -1.2 5,991,442 - -0.9 5,991,629 + QEN71_RS26860 0.22 -1.1 5,991,661 + QEN71_RS26860 0.25 +0.4 5,991,668 - QEN71_RS26860 0.26 +2.6 5,991,685 + QEN71_RS26860 0.28 +1.0 5,991,685 + QEN71_RS26860 0.28 +2.3 5,991,685 + QEN71_RS26860 0.28 +0.2 5,991,685 + QEN71_RS26860 0.28 +1.1 5,991,685 + QEN71_RS26860 0.28 -0.3 5,991,686 - QEN71_RS26860 0.28 +0.8 5,991,686 - QEN71_RS26860 0.28 -0.6 5,991,686 - QEN71_RS26860 0.28 -1.0 5,991,686 - QEN71_RS26860 0.28 +0.7 5,991,686 - QEN71_RS26860 0.28 +1.2 5,991,686 - QEN71_RS26860 0.28 +0.4 5,991,686 - QEN71_RS26860 0.28 -1.4 5,991,770 + QEN71_RS26860 0.37 +0.7 5,991,770 + QEN71_RS26860 0.37 -0.6 5,991,770 + QEN71_RS26860 0.37 +1.3 5,991,770 + QEN71_RS26860 0.37 -0.0 5,991,771 - QEN71_RS26860 0.38 -1.4 5,991,771 - QEN71_RS26860 0.38 -1.1 5,991,771 - QEN71_RS26860 0.38 +0.8 5,991,771 - QEN71_RS26860 0.38 -0.1 5,991,794 + QEN71_RS26860 0.40 -1.0 5,991,794 + QEN71_RS26860 0.40 +0.5 5,991,795 - QEN71_RS26860 0.40 +0.2 5,991,795 - QEN71_RS26860 0.40 -1.2 5,991,795 - QEN71_RS26860 0.40 -1.6 5,992,004 + QEN71_RS26860 0.63 -0.2 5,992,004 + QEN71_RS26860 0.63 +0.4 5,992,004 + QEN71_RS26860 0.63 -0.3 5,992,004 + QEN71_RS26860 0.63 +0.5 5,992,004 + QEN71_RS26860 0.63 +0.7 5,992,004 + QEN71_RS26860 0.63 +0.2 5,992,005 - QEN71_RS26860 0.63 +0.8 5,992,076 + QEN71_RS26860 0.71 -0.6 5,992,325 + +1.2 5,992,326 - +1.2 5,992,343 + -1.2 5,992,344 - -0.2 5,992,344 - +1.1 5,992,455 + QEN71_RS26865 0.25 -0.7 5,992,455 + QEN71_RS26865 0.25 -0.7 5,992,455 + QEN71_RS26865 0.25 -0.2 5,992,455 + QEN71_RS26865 0.25 -0.2 5,992,455 + QEN71_RS26865 0.25 +1.0 5,992,455 + QEN71_RS26865 0.25 -1.7 5,992,455 + QEN71_RS26865 0.25 +1.5 5,992,456 - QEN71_RS26865 0.25 -0.3 5,992,456 - QEN71_RS26865 0.25 +1.8 5,992,456 - QEN71_RS26865 0.25 +2.4 5,992,524 - QEN71_RS26865 0.40 +1.4 5,992,539 + QEN71_RS26865 0.44 +0.4 5,992,558 + QEN71_RS26865 0.48 -0.2 5,992,559 - QEN71_RS26865 0.48 -1.0 5,992,559 - QEN71_RS26865 0.48 -0.2 5,992,559 - QEN71_RS26865 0.48 +0.5 5,992,662 + QEN71_RS26865 0.71 -0.5 5,992,665 + QEN71_RS26865 0.72 +0.5 5,992,666 - QEN71_RS26865 0.72 -0.2 5,992,666 - QEN71_RS26865 0.72 -1.7 5,992,666 - QEN71_RS26865 0.72 -0.4 5,992,674 - QEN71_RS26865 0.74 +0.4 5,992,674 - QEN71_RS26865 0.74 +0.5 5,992,867 + +0.4 5,992,867 + +0.4 5,992,867 + +0.3 5,992,867 + +0.0 5,992,881 + -1.6 5,992,923 - -0.5 5,992,956 + -0.5 5,992,956 + +0.3 5,992,956 + -1.3 5,992,956 + +1.1 5,992,956 + +0.8 5,992,957 - +0.1 5,992,957 - +2.2 5,992,957 - -0.2 5,992,957 - -0.8 5,992,957 - -2.0 5,993,041 + -0.5 5,993,041 + -1.7 5,993,042 - +0.4 5,993,042 - -0.8 5,993,042 - +0.1 5,993,295 + QEN71_RS26870 0.34 +0.2 5,993,296 - QEN71_RS26870 0.34 +0.7 5,993,296 - QEN71_RS26870 0.34 -1.4 5,993,296 - QEN71_RS26870 0.34 +0.5 5,993,296 - QEN71_RS26870 0.34 +0.1 5,993,374 + QEN71_RS26870 0.45 +0.1 5,993,741 - +0.1 5,993,762 + -0.0 5,993,762 + -0.3 5,993,762 + +0.1 5,993,763 - +0.2 5,993,763 - -0.2 5,993,763 - +0.5
Or see this region's nucleotide sequence