Experiment: Motility_outer_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26465 and QEN71_RS26470 are separated by 48 nucleotides QEN71_RS26470 and QEN71_RS26475 are separated by 11 nucleotides QEN71_RS26475 and QEN71_RS26480 are separated by 42 nucleotides
QEN71_RS26465: QEN71_RS26465 - polynucleotide adenylyltransferase PcnB, at 5,901,296 to 5,902,891
_RS26465
QEN71_RS26470: QEN71_RS26470 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 5,902,940 to 5,903,494
_RS26470
QEN71_RS26475: QEN71_RS26475 - deoxynucleoside kinase, at 5,903,506 to 5,904,186
_RS26475
QEN71_RS26480: QEN71_RS26480 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 5,904,229 to 5,905,044
_RS26480
Position (kb) 5902
5903
5904 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5901.947 kb on + strand, within QEN71_RS26465 at 5901.947 kb on + strand, within QEN71_RS26465 at 5901.947 kb on + strand, within QEN71_RS26465 at 5901.948 kb on - strand, within QEN71_RS26465 at 5901.950 kb on + strand, within QEN71_RS26465 at 5901.950 kb on + strand, within QEN71_RS26465 at 5901.950 kb on + strand, within QEN71_RS26465 at 5901.951 kb on - strand, within QEN71_RS26465 at 5901.951 kb on - strand, within QEN71_RS26465 at 5901.981 kb on - strand, within QEN71_RS26465 at 5901.981 kb on - strand, within QEN71_RS26465 at 5902.046 kb on + strand, within QEN71_RS26465 at 5902.448 kb on + strand, within QEN71_RS26465 at 5902.621 kb on + strand, within QEN71_RS26465 at 5902.622 kb on - strand, within QEN71_RS26465 at 5902.632 kb on - strand, within QEN71_RS26465 at 5902.934 kb on + strand at 5902.934 kb on + strand at 5902.934 kb on + strand at 5902.934 kb on + strand at 5903.560 kb on + strand at 5903.560 kb on + strand at 5903.683 kb on + strand, within QEN71_RS26475 at 5903.683 kb on + strand, within QEN71_RS26475 at 5903.683 kb on + strand, within QEN71_RS26475 at 5903.684 kb on - strand, within QEN71_RS26475 at 5903.684 kb on - strand, within QEN71_RS26475 at 5903.855 kb on - strand, within QEN71_RS26475 at 5903.855 kb on - strand, within QEN71_RS26475 at 5903.855 kb on - strand, within QEN71_RS26475 at 5903.863 kb on + strand, within QEN71_RS26475 at 5903.863 kb on + strand, within QEN71_RS26475 at 5903.863 kb on + strand, within QEN71_RS26475 at 5903.863 kb on + strand, within QEN71_RS26475 at 5903.864 kb on - strand, within QEN71_RS26475 at 5903.890 kb on - strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.920 kb on + strand, within QEN71_RS26475 at 5903.921 kb on - strand, within QEN71_RS26475 at 5903.921 kb on - strand, within QEN71_RS26475 at 5903.921 kb on - strand, within QEN71_RS26475 at 5903.921 kb on - strand, within QEN71_RS26475 at 5903.921 kb on - strand, within QEN71_RS26475 at 5903.921 kb on - strand, within QEN71_RS26475 at 5903.921 kb on - strand, within QEN71_RS26475 at 5903.921 kb on - strand, within QEN71_RS26475 at 5904.001 kb on + strand, within QEN71_RS26475 at 5904.001 kb on + strand, within QEN71_RS26475 at 5904.001 kb on + strand, within QEN71_RS26475 at 5904.001 kb on + strand, within QEN71_RS26475 at 5904.002 kb on - strand, within QEN71_RS26475 at 5904.002 kb on - strand, within QEN71_RS26475 at 5904.002 kb on - strand, within QEN71_RS26475 at 5904.002 kb on - strand, within QEN71_RS26475 at 5904.025 kb on + strand, within QEN71_RS26475 at 5904.025 kb on + strand, within QEN71_RS26475 at 5904.025 kb on + strand, within QEN71_RS26475 at 5904.026 kb on - strand, within QEN71_RS26475 at 5904.026 kb on - strand, within QEN71_RS26475 at 5904.040 kb on + strand, within QEN71_RS26475 at 5904.040 kb on + strand, within QEN71_RS26475 at 5904.040 kb on + strand, within QEN71_RS26475 at 5904.040 kb on + strand, within QEN71_RS26475 at 5904.040 kb on + strand, within QEN71_RS26475 at 5904.040 kb on + strand, within QEN71_RS26475 at 5904.040 kb on + strand, within QEN71_RS26475 at 5904.040 kb on + strand, within QEN71_RS26475 at 5904.040 kb on + strand, within QEN71_RS26475 at 5904.041 kb on - strand, within QEN71_RS26475 at 5904.041 kb on - strand, within QEN71_RS26475 at 5904.041 kb on - strand, within QEN71_RS26475 at 5904.041 kb on - strand, within QEN71_RS26475 at 5904.041 kb on - strand, within QEN71_RS26475 at 5904.041 kb on - strand, within QEN71_RS26475 at 5904.041 kb on - strand, within QEN71_RS26475 at 5904.041 kb on - strand, within QEN71_RS26475 at 5904.046 kb on + strand, within QEN71_RS26475 at 5904.046 kb on + strand, within QEN71_RS26475 at 5904.046 kb on + strand, within QEN71_RS26475 at 5904.046 kb on + strand, within QEN71_RS26475 at 5904.046 kb on + strand, within QEN71_RS26475 at 5904.047 kb on - strand, within QEN71_RS26475 at 5904.047 kb on - strand, within QEN71_RS26475 at 5904.182 kb on + strand at 5904.182 kb on + strand at 5904.182 kb on + strand at 5904.182 kb on + strand at 5904.182 kb on + strand at 5904.182 kb on + strand at 5904.182 kb on + strand at 5904.182 kb on + strand at 5904.183 kb on - strand at 5904.183 kb on - strand at 5904.183 kb on - strand at 5904.183 kb on - strand at 5904.184 kb on + strand at 5904.184 kb on + strand at 5904.184 kb on + strand at 5904.184 kb on + strand at 5904.185 kb on - strand at 5904.185 kb on - strand at 5904.204 kb on + strand at 5904.205 kb on - strand at 5904.205 kb on - strand at 5904.235 kb on + strand at 5904.235 kb on + strand at 5904.235 kb on + strand at 5904.325 kb on + strand, within QEN71_RS26480 at 5904.325 kb on + strand, within QEN71_RS26480 at 5904.326 kb on - strand, within QEN71_RS26480 at 5904.452 kb on - strand, within QEN71_RS26480
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample remove 5,901,947 + QEN71_RS26465 0.41 -1.0 5,901,947 + QEN71_RS26465 0.41 -0.2 5,901,947 + QEN71_RS26465 0.41 -1.6 5,901,948 - QEN71_RS26465 0.41 -1.2 5,901,950 + QEN71_RS26465 0.41 -0.2 5,901,950 + QEN71_RS26465 0.41 -0.2 5,901,950 + QEN71_RS26465 0.41 -0.5 5,901,951 - QEN71_RS26465 0.41 -1.8 5,901,951 - QEN71_RS26465 0.41 -0.2 5,901,981 - QEN71_RS26465 0.43 -0.5 5,901,981 - QEN71_RS26465 0.43 -1.0 5,902,046 + QEN71_RS26465 0.47 -1.2 5,902,448 + QEN71_RS26465 0.72 -0.2 5,902,621 + QEN71_RS26465 0.83 -1.2 5,902,622 - QEN71_RS26465 0.83 -2.0 5,902,632 - QEN71_RS26465 0.84 -0.5 5,902,934 + -1.1 5,902,934 + -1.5 5,902,934 + +0.0 5,902,934 + -2.7 5,903,560 + -1.4 5,903,560 + -0.5 5,903,683 + QEN71_RS26475 0.26 +0.1 5,903,683 + QEN71_RS26475 0.26 -1.0 5,903,683 + QEN71_RS26475 0.26 +0.1 5,903,684 - QEN71_RS26475 0.26 -2.0 5,903,684 - QEN71_RS26475 0.26 -1.6 5,903,855 - QEN71_RS26475 0.51 -2.0 5,903,855 - QEN71_RS26475 0.51 -0.2 5,903,855 - QEN71_RS26475 0.51 -2.8 5,903,863 + QEN71_RS26475 0.52 -1.5 5,903,863 + QEN71_RS26475 0.52 +0.1 5,903,863 + QEN71_RS26475 0.52 +0.2 5,903,863 + QEN71_RS26475 0.52 -1.2 5,903,864 - QEN71_RS26475 0.53 -1.5 5,903,890 - QEN71_RS26475 0.56 -2.1 5,903,920 + QEN71_RS26475 0.61 +1.6 5,903,920 + QEN71_RS26475 0.61 -1.4 5,903,920 + QEN71_RS26475 0.61 -0.2 5,903,920 + QEN71_RS26475 0.61 -0.8 5,903,920 + QEN71_RS26475 0.61 -0.2 5,903,920 + QEN71_RS26475 0.61 -0.4 5,903,920 + QEN71_RS26475 0.61 -1.9 5,903,920 + QEN71_RS26475 0.61 -0.7 5,903,920 + QEN71_RS26475 0.61 -3.2 5,903,920 + QEN71_RS26475 0.61 -0.2 5,903,920 + QEN71_RS26475 0.61 +0.3 5,903,921 - QEN71_RS26475 0.61 -1.4 5,903,921 - QEN71_RS26475 0.61 -1.3 5,903,921 - QEN71_RS26475 0.61 -0.5 5,903,921 - QEN71_RS26475 0.61 -3.5 5,903,921 - QEN71_RS26475 0.61 +0.2 5,903,921 - QEN71_RS26475 0.61 +0.1 5,903,921 - QEN71_RS26475 0.61 -0.7 5,903,921 - QEN71_RS26475 0.61 -2.1 5,904,001 + QEN71_RS26475 0.73 +0.8 5,904,001 + QEN71_RS26475 0.73 +1.0 5,904,001 + QEN71_RS26475 0.73 -0.5 5,904,001 + QEN71_RS26475 0.73 -1.3 5,904,002 - QEN71_RS26475 0.73 -1.4 5,904,002 - QEN71_RS26475 0.73 +0.6 5,904,002 - QEN71_RS26475 0.73 -1.5 5,904,002 - QEN71_RS26475 0.73 -0.8 5,904,025 + QEN71_RS26475 0.76 +1.6 5,904,025 + QEN71_RS26475 0.76 -0.6 5,904,025 + QEN71_RS26475 0.76 -1.2 5,904,026 - QEN71_RS26475 0.76 -2.3 5,904,026 - QEN71_RS26475 0.76 -1.0 5,904,040 + QEN71_RS26475 0.78 -0.1 5,904,040 + QEN71_RS26475 0.78 -1.9 5,904,040 + QEN71_RS26475 0.78 +0.7 5,904,040 + QEN71_RS26475 0.78 -0.1 5,904,040 + QEN71_RS26475 0.78 +1.0 5,904,040 + QEN71_RS26475 0.78 +0.7 5,904,040 + QEN71_RS26475 0.78 +1.0 5,904,040 + QEN71_RS26475 0.78 +0.7 5,904,040 + QEN71_RS26475 0.78 -1.7 5,904,041 - QEN71_RS26475 0.79 -1.3 5,904,041 - QEN71_RS26475 0.79 -1.1 5,904,041 - QEN71_RS26475 0.79 +0.2 5,904,041 - QEN71_RS26475 0.79 -0.5 5,904,041 - QEN71_RS26475 0.79 -2.0 5,904,041 - QEN71_RS26475 0.79 -0.2 5,904,041 - QEN71_RS26475 0.79 -2.9 5,904,041 - QEN71_RS26475 0.79 -0.5 5,904,046 + QEN71_RS26475 0.79 -0.7 5,904,046 + QEN71_RS26475 0.79 -0.2 5,904,046 + QEN71_RS26475 0.79 +2.5 5,904,046 + QEN71_RS26475 0.79 +1.8 5,904,046 + QEN71_RS26475 0.79 +0.8 5,904,047 - QEN71_RS26475 0.79 +1.6 5,904,047 - QEN71_RS26475 0.79 -0.8 5,904,182 + +1.5 5,904,182 + +0.3 5,904,182 + -1.8 5,904,182 + -2.3 5,904,182 + -0.6 5,904,182 + -0.2 5,904,182 + -0.9 5,904,182 + -1.1 5,904,183 - -1.4 5,904,183 - -1.7 5,904,183 - -2.6 5,904,183 - -1.7 5,904,184 + -1.4 5,904,184 + -0.4 5,904,184 + -0.1 5,904,184 + +0.1 5,904,185 - -1.4 5,904,185 - -2.9 5,904,204 + -1.3 5,904,205 - -2.7 5,904,205 - -2.9 5,904,235 + -1.8 5,904,235 + -1.5 5,904,235 + -3.8 5,904,325 + QEN71_RS26480 0.12 -1.2 5,904,325 + QEN71_RS26480 0.12 -0.8 5,904,326 - QEN71_RS26480 0.12 -1.2 5,904,452 - QEN71_RS26480 0.27 -1.5
Or see this region's nucleotide sequence