Experiment: Motility_outer_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26450 and QEN71_RS26455 are separated by 54 nucleotides QEN71_RS26455 and QEN71_RS26460 overlap by 8 nucleotides QEN71_RS26460 and QEN71_RS26465 overlap by 4 nucleotides
QEN71_RS26450: QEN71_RS26450 - AI-2E family transporter, at 5,898,716 to 5,899,792
_RS26450
QEN71_RS26455: QEN71_RS26455 - DnaA regulatory inactivator Hda, at 5,899,847 to 5,900,620
_RS26455
QEN71_RS26460: QEN71_RS26460 - HAD family hydrolase, at 5,900,613 to 5,901,299
_RS26460
QEN71_RS26465: QEN71_RS26465 - polynucleotide adenylyltransferase PcnB, at 5,901,296 to 5,902,891
_RS26465
Position (kb)
5900
5901
5902 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.763 kb on + strand at 5899.806 kb on + strand at 5899.806 kb on + strand at 5899.821 kb on + strand at 5899.821 kb on + strand at 5899.828 kb on + strand at 5899.828 kb on + strand at 5899.828 kb on + strand at 5899.828 kb on + strand at 5899.832 kb on + strand at 5899.832 kb on + strand at 5899.832 kb on + strand at 5899.839 kb on + strand at 5899.839 kb on + strand at 5899.839 kb on + strand at 5899.839 kb on + strand at 5899.839 kb on + strand at 5899.839 kb on + strand at 5899.839 kb on + strand at 5899.843 kb on + strand at 5899.843 kb on + strand at 5899.843 kb on + strand at 5899.843 kb on + strand at 5900.599 kb on + strand at 5900.599 kb on + strand at 5900.599 kb on + strand at 5900.600 kb on - strand at 5900.604 kb on + strand at 5900.604 kb on + strand at 5900.604 kb on + strand at 5900.618 kb on + strand at 5900.754 kb on + strand, within QEN71_RS26460 at 5900.754 kb on + strand, within QEN71_RS26460 at 5900.754 kb on + strand, within QEN71_RS26460 at 5900.754 kb on + strand, within QEN71_RS26460 at 5900.754 kb on + strand, within QEN71_RS26460 at 5900.755 kb on - strand, within QEN71_RS26460 at 5900.784 kb on + strand, within QEN71_RS26460 at 5900.784 kb on + strand, within QEN71_RS26460 at 5900.784 kb on + strand, within QEN71_RS26460 at 5900.784 kb on + strand, within QEN71_RS26460 at 5900.784 kb on + strand, within QEN71_RS26460 at 5900.784 kb on + strand, within QEN71_RS26460 at 5900.785 kb on - strand, within QEN71_RS26460 at 5900.785 kb on - strand, within QEN71_RS26460 at 5900.785 kb on - strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.853 kb on + strand, within QEN71_RS26460 at 5900.854 kb on - strand, within QEN71_RS26460 at 5900.854 kb on - strand, within QEN71_RS26460 at 5900.854 kb on - strand, within QEN71_RS26460 at 5901.051 kb on + strand, within QEN71_RS26460 at 5901.051 kb on + strand, within QEN71_RS26460 at 5901.051 kb on + strand, within QEN71_RS26460 at 5901.052 kb on - strand, within QEN71_RS26460 at 5901.082 kb on - strand, within QEN71_RS26460 at 5901.159 kb on + strand, within QEN71_RS26460 at 5901.159 kb on + strand, within QEN71_RS26460 at 5901.165 kb on + strand, within QEN71_RS26460 at 5901.165 kb on + strand, within QEN71_RS26460 at 5901.166 kb on - strand, within QEN71_RS26460 at 5901.166 kb on - strand, within QEN71_RS26460 at 5901.166 kb on - strand, within QEN71_RS26460 at 5901.180 kb on - strand, within QEN71_RS26460 at 5901.947 kb on + strand, within QEN71_RS26465 at 5901.947 kb on + strand, within QEN71_RS26465 at 5901.947 kb on + strand, within QEN71_RS26465 at 5901.948 kb on - strand, within QEN71_RS26465 at 5901.950 kb on + strand, within QEN71_RS26465 at 5901.950 kb on + strand, within QEN71_RS26465 at 5901.950 kb on + strand, within QEN71_RS26465 at 5901.951 kb on - strand, within QEN71_RS26465 at 5901.951 kb on - strand, within QEN71_RS26465 at 5901.981 kb on - strand, within QEN71_RS26465 at 5901.981 kb on - strand, within QEN71_RS26465 at 5902.046 kb on + strand, within QEN71_RS26465
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample remove 5,899,763 + -0.3 5,899,763 + -0.8 5,899,763 + +1.2 5,899,763 + -0.4 5,899,763 + +0.2 5,899,763 + -0.1 5,899,763 + -0.0 5,899,763 + -1.8 5,899,763 + -1.4 5,899,763 + -0.7 5,899,763 + -0.8 5,899,763 + +1.0 5,899,763 + -0.2 5,899,763 + -0.5 5,899,763 + +0.3 5,899,763 + -0.8 5,899,763 + -0.5 5,899,763 + -0.9 5,899,763 + -1.3 5,899,806 + +0.2 5,899,806 + -1.0 5,899,821 + -0.2 5,899,821 + +0.3 5,899,828 + +0.1 5,899,828 + -2.0 5,899,828 + -1.0 5,899,828 + -1.3 5,899,832 + -1.0 5,899,832 + +0.1 5,899,832 + -0.5 5,899,839 + +1.3 5,899,839 + -1.7 5,899,839 + -2.3 5,899,839 + +1.3 5,899,839 + +1.1 5,899,839 + -1.9 5,899,839 + -1.1 5,899,843 + +0.1 5,899,843 + -1.8 5,899,843 + -1.3 5,899,843 + +0.3 5,900,599 + -0.1 5,900,599 + +0.2 5,900,599 + +0.6 5,900,600 - -0.2 5,900,604 + +0.0 5,900,604 + +1.0 5,900,604 + +0.2 5,900,618 + +1.7 5,900,754 + QEN71_RS26460 0.21 +0.1 5,900,754 + QEN71_RS26460 0.21 +1.4 5,900,754 + QEN71_RS26460 0.21 +1.3 5,900,754 + QEN71_RS26460 0.21 -1.2 5,900,754 + QEN71_RS26460 0.21 +0.8 5,900,755 - QEN71_RS26460 0.21 -0.2 5,900,784 + QEN71_RS26460 0.25 +1.2 5,900,784 + QEN71_RS26460 0.25 -1.0 5,900,784 + QEN71_RS26460 0.25 +0.6 5,900,784 + QEN71_RS26460 0.25 +0.9 5,900,784 + QEN71_RS26460 0.25 +1.4 5,900,784 + QEN71_RS26460 0.25 +1.1 5,900,785 - QEN71_RS26460 0.25 -2.6 5,900,785 - QEN71_RS26460 0.25 -0.8 5,900,785 - QEN71_RS26460 0.25 -1.0 5,900,853 + QEN71_RS26460 0.35 +1.7 5,900,853 + QEN71_RS26460 0.35 +0.9 5,900,853 + QEN71_RS26460 0.35 -0.5 5,900,853 + QEN71_RS26460 0.35 +1.8 5,900,853 + QEN71_RS26460 0.35 +1.7 5,900,853 + QEN71_RS26460 0.35 +2.1 5,900,853 + QEN71_RS26460 0.35 +1.1 5,900,853 + QEN71_RS26460 0.35 +0.7 5,900,853 + QEN71_RS26460 0.35 +0.9 5,900,853 + QEN71_RS26460 0.35 +0.1 5,900,854 - QEN71_RS26460 0.35 -0.8 5,900,854 - QEN71_RS26460 0.35 -0.4 5,900,854 - QEN71_RS26460 0.35 -0.5 5,901,051 + QEN71_RS26460 0.64 -1.5 5,901,051 + QEN71_RS26460 0.64 -1.7 5,901,051 + QEN71_RS26460 0.64 +0.6 5,901,052 - QEN71_RS26460 0.64 -0.2 5,901,082 - QEN71_RS26460 0.68 -1.6 5,901,159 + QEN71_RS26460 0.79 +0.8 5,901,159 + QEN71_RS26460 0.79 -0.2 5,901,165 + QEN71_RS26460 0.80 -0.8 5,901,165 + QEN71_RS26460 0.80 -1.4 5,901,166 - QEN71_RS26460 0.80 -0.2 5,901,166 - QEN71_RS26460 0.80 -1.2 5,901,166 - QEN71_RS26460 0.80 -0.4 5,901,180 - QEN71_RS26460 0.83 -1.2 5,901,947 + QEN71_RS26465 0.41 -1.0 5,901,947 + QEN71_RS26465 0.41 -0.2 5,901,947 + QEN71_RS26465 0.41 -1.6 5,901,948 - QEN71_RS26465 0.41 -1.2 5,901,950 + QEN71_RS26465 0.41 -0.2 5,901,950 + QEN71_RS26465 0.41 -0.2 5,901,950 + QEN71_RS26465 0.41 -0.5 5,901,951 - QEN71_RS26465 0.41 -1.8 5,901,951 - QEN71_RS26465 0.41 -0.2 5,901,981 - QEN71_RS26465 0.43 -0.5 5,901,981 - QEN71_RS26465 0.43 -1.0 5,902,046 + QEN71_RS26465 0.47 -1.2
Or see this region's nucleotide sequence