Experiment: Motility_outer_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS13525 and QEN71_RS13530 are separated by 57 nucleotides QEN71_RS13530 and QEN71_RS13535 are separated by 20 nucleotides
QEN71_RS13525: QEN71_RS13525 - DUF3141 domain-containing protein, at 3,016,430 to 3,018,730
_RS13525
QEN71_RS13530: QEN71_RS13530 - phosphate acetyltransferase, at 3,018,788 to 3,019,753
_RS13530
QEN71_RS13535: QEN71_RS13535 - acetate/propionate family kinase, at 3,019,774 to 3,020,955
_RS13535
Position (kb)
3018
3019
3020 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3017.873 kb on + strand, within QEN71_RS13525 at 3017.873 kb on + strand, within QEN71_RS13525 at 3017.873 kb on + strand, within QEN71_RS13525 at 3017.874 kb on - strand, within QEN71_RS13525 at 3017.874 kb on - strand, within QEN71_RS13525 at 3017.911 kb on + strand, within QEN71_RS13525 at 3017.912 kb on - strand, within QEN71_RS13525 at 3017.958 kb on + strand, within QEN71_RS13525 at 3017.959 kb on - strand, within QEN71_RS13525 at 3017.959 kb on - strand, within QEN71_RS13525 at 3017.991 kb on - strand, within QEN71_RS13525 at 3018.191 kb on + strand, within QEN71_RS13525 at 3018.192 kb on - strand, within QEN71_RS13525 at 3018.377 kb on + strand, within QEN71_RS13525 at 3018.377 kb on + strand, within QEN71_RS13525 at 3018.377 kb on + strand, within QEN71_RS13525 at 3018.377 kb on + strand, within QEN71_RS13525 at 3018.378 kb on - strand, within QEN71_RS13525 at 3018.378 kb on - strand, within QEN71_RS13525 at 3018.378 kb on - strand, within QEN71_RS13525 at 3018.378 kb on - strand, within QEN71_RS13525 at 3018.378 kb on - strand, within QEN71_RS13525 at 3018.378 kb on - strand, within QEN71_RS13525 at 3018.378 kb on - strand, within QEN71_RS13525 at 3018.799 kb on + strand at 3018.799 kb on + strand at 3018.799 kb on + strand at 3018.800 kb on - strand at 3018.800 kb on - strand at 3018.800 kb on - strand at 3018.800 kb on - strand at 3018.800 kb on - strand at 3019.049 kb on - strand, within QEN71_RS13530 at 3019.049 kb on - strand, within QEN71_RS13530 at 3019.447 kb on - strand, within QEN71_RS13530 at 3019.761 kb on + strand at 3019.762 kb on - strand at 3019.886 kb on - strand at 3019.886 kb on - strand at 3019.886 kb on - strand at 3019.886 kb on - strand at 3019.886 kb on - strand at 3019.886 kb on - strand at 3019.886 kb on - strand at 3020.074 kb on + strand, within QEN71_RS13535 at 3020.074 kb on + strand, within QEN71_RS13535 at 3020.075 kb on - strand, within QEN71_RS13535 at 3020.075 kb on - strand, within QEN71_RS13535 at 3020.326 kb on + strand, within QEN71_RS13535 at 3020.326 kb on + strand, within QEN71_RS13535 at 3020.332 kb on + strand, within QEN71_RS13535 at 3020.332 kb on + strand, within QEN71_RS13535 at 3020.332 kb on + strand, within QEN71_RS13535 at 3020.332 kb on + strand, within QEN71_RS13535 at 3020.332 kb on + strand, within QEN71_RS13535 at 3020.333 kb on - strand, within QEN71_RS13535 at 3020.333 kb on - strand, within QEN71_RS13535 at 3020.333 kb on - strand, within QEN71_RS13535 at 3020.578 kb on + strand, within QEN71_RS13535 at 3020.578 kb on + strand, within QEN71_RS13535 at 3020.578 kb on + strand, within QEN71_RS13535 at 3020.579 kb on - strand, within QEN71_RS13535 at 3020.683 kb on + strand, within QEN71_RS13535
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample remove 3,017,873 + QEN71_RS13525 0.63 -0.7 3,017,873 + QEN71_RS13525 0.63 -1.5 3,017,873 + QEN71_RS13525 0.63 -2.3 3,017,874 - QEN71_RS13525 0.63 +0.5 3,017,874 - QEN71_RS13525 0.63 -1.8 3,017,911 + QEN71_RS13525 0.64 +0.8 3,017,912 - QEN71_RS13525 0.64 -0.7 3,017,958 + QEN71_RS13525 0.66 +0.6 3,017,959 - QEN71_RS13525 0.66 -0.1 3,017,959 - QEN71_RS13525 0.66 +0.6 3,017,991 - QEN71_RS13525 0.68 -1.3 3,018,191 + QEN71_RS13525 0.77 -1.0 3,018,192 - QEN71_RS13525 0.77 +0.1 3,018,377 + QEN71_RS13525 0.85 +0.4 3,018,377 + QEN71_RS13525 0.85 +0.0 3,018,377 + QEN71_RS13525 0.85 -1.2 3,018,377 + QEN71_RS13525 0.85 -1.0 3,018,378 - QEN71_RS13525 0.85 -0.6 3,018,378 - QEN71_RS13525 0.85 -0.3 3,018,378 - QEN71_RS13525 0.85 +1.6 3,018,378 - QEN71_RS13525 0.85 -0.9 3,018,378 - QEN71_RS13525 0.85 -1.3 3,018,378 - QEN71_RS13525 0.85 -2.2 3,018,378 - QEN71_RS13525 0.85 +0.4 3,018,799 + -0.1 3,018,799 + +0.6 3,018,799 + +0.6 3,018,800 - -0.0 3,018,800 - +1.0 3,018,800 - +0.2 3,018,800 - +1.5 3,018,800 - +0.4 3,019,049 - QEN71_RS13530 0.27 -0.9 3,019,049 - QEN71_RS13530 0.27 -1.2 3,019,447 - QEN71_RS13530 0.68 -0.6 3,019,761 + -0.7 3,019,762 - +0.6 3,019,886 - +0.2 3,019,886 - -0.7 3,019,886 - +0.0 3,019,886 - +0.4 3,019,886 - -1.8 3,019,886 - +2.6 3,019,886 - +1.0 3,020,074 + QEN71_RS13535 0.25 -0.6 3,020,074 + QEN71_RS13535 0.25 +1.3 3,020,075 - QEN71_RS13535 0.25 -0.1 3,020,075 - QEN71_RS13535 0.25 +1.7 3,020,326 + QEN71_RS13535 0.47 -2.1 3,020,326 + QEN71_RS13535 0.47 +0.0 3,020,332 + QEN71_RS13535 0.47 -0.9 3,020,332 + QEN71_RS13535 0.47 -1.3 3,020,332 + QEN71_RS13535 0.47 -0.5 3,020,332 + QEN71_RS13535 0.47 -0.0 3,020,332 + QEN71_RS13535 0.47 -1.1 3,020,333 - QEN71_RS13535 0.47 +1.1 3,020,333 - QEN71_RS13535 0.47 -0.6 3,020,333 - QEN71_RS13535 0.47 -1.0 3,020,578 + QEN71_RS13535 0.68 +1.1 3,020,578 + QEN71_RS13535 0.68 +0.1 3,020,578 + QEN71_RS13535 0.68 -0.4 3,020,579 - QEN71_RS13535 0.68 -0.1 3,020,683 + QEN71_RS13535 0.77 -0.3
Or see this region's nucleotide sequence