Experiment: Motility_outer_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS07500 and QEN71_RS07505 overlap by 4 nucleotides QEN71_RS07505 and QEN71_RS07510 are separated by 3 nucleotides QEN71_RS07510 and QEN71_RS07515 are separated by 48 nucleotides QEN71_RS07515 and QEN71_RS07520 are separated by 207 nucleotides
QEN71_RS07500: QEN71_RS07500 - amidase, at 1,663,304 to 1,664,443
_RS07500
QEN71_RS07505: QEN71_RS07505 - nuclear transport factor 2 family protein, at 1,664,440 to 1,664,967
_RS07505
QEN71_RS07510: QEN71_RS07510 - hypothetical protein, at 1,664,971 to 1,665,363
_RS07510
QEN71_RS07515: QEN71_RS07515 - acyl-CoA dehydrogenase family protein, at 1,665,412 to 1,666,608
_RS07515
QEN71_RS07520: QEN71_RS07520 - ATP-binding protein, at 1,666,816 to 1,668,300
_RS07520
Position (kb) 1665
1666
1667 Strain fitness (log2 ratio) -1
0
1 at 1664.523 kb on + strand, within QEN71_RS07505 at 1664.523 kb on + strand, within QEN71_RS07505 at 1664.523 kb on + strand, within QEN71_RS07505 at 1664.523 kb on + strand, within QEN71_RS07505 at 1664.523 kb on + strand, within QEN71_RS07505 at 1664.524 kb on - strand, within QEN71_RS07505 at 1664.524 kb on - strand, within QEN71_RS07505 at 1664.524 kb on - strand, within QEN71_RS07505 at 1664.524 kb on - strand, within QEN71_RS07505 at 1664.769 kb on - strand, within QEN71_RS07505 at 1665.069 kb on - strand, within QEN71_RS07510 at 1665.093 kb on - strand, within QEN71_RS07510 at 1665.269 kb on - strand, within QEN71_RS07510 at 1665.467 kb on + strand at 1665.701 kb on + strand, within QEN71_RS07515 at 1665.701 kb on + strand, within QEN71_RS07515 at 1665.701 kb on + strand, within QEN71_RS07515 at 1665.702 kb on - strand, within QEN71_RS07515 at 1665.906 kb on - strand, within QEN71_RS07515 at 1666.250 kb on + strand, within QEN71_RS07515 at 1666.289 kb on + strand, within QEN71_RS07515 at 1666.290 kb on - strand, within QEN71_RS07515 at 1666.348 kb on - strand, within QEN71_RS07515 at 1666.421 kb on + strand, within QEN71_RS07515 at 1666.668 kb on + strand at 1666.777 kb on - strand at 1667.003 kb on - strand, within QEN71_RS07520 at 1667.062 kb on + strand, within QEN71_RS07520 at 1667.074 kb on + strand, within QEN71_RS07520 at 1667.122 kb on + strand, within QEN71_RS07520 at 1667.122 kb on + strand, within QEN71_RS07520 at 1667.123 kb on - strand, within QEN71_RS07520 at 1667.479 kb on - strand, within QEN71_RS07520
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample remove 1,664,523 + QEN71_RS07505 0.16 -1.6 1,664,523 + QEN71_RS07505 0.16 -0.2 1,664,523 + QEN71_RS07505 0.16 +0.9 1,664,523 + QEN71_RS07505 0.16 +0.4 1,664,523 + QEN71_RS07505 0.16 -1.6 1,664,524 - QEN71_RS07505 0.16 +0.6 1,664,524 - QEN71_RS07505 0.16 -1.1 1,664,524 - QEN71_RS07505 0.16 +0.6 1,664,524 - QEN71_RS07505 0.16 +0.4 1,664,769 - QEN71_RS07505 0.62 +0.6 1,665,069 - QEN71_RS07510 0.25 -0.4 1,665,093 - QEN71_RS07510 0.31 +0.6 1,665,269 - QEN71_RS07510 0.76 +0.2 1,665,467 + -0.5 1,665,701 + QEN71_RS07515 0.24 +0.7 1,665,701 + QEN71_RS07515 0.24 +1.1 1,665,701 + QEN71_RS07515 0.24 +0.3 1,665,702 - QEN71_RS07515 0.24 +1.4 1,665,906 - QEN71_RS07515 0.41 +0.9 1,666,250 + QEN71_RS07515 0.70 -0.5 1,666,289 + QEN71_RS07515 0.73 -0.6 1,666,290 - QEN71_RS07515 0.73 -0.7 1,666,348 - QEN71_RS07515 0.78 +0.8 1,666,421 + QEN71_RS07515 0.84 +0.4 1,666,668 + +0.1 1,666,777 - -0.1 1,667,003 - QEN71_RS07520 0.13 -0.1 1,667,062 + QEN71_RS07520 0.17 +0.4 1,667,074 + QEN71_RS07520 0.17 -0.8 1,667,122 + QEN71_RS07520 0.21 +1.5 1,667,122 + QEN71_RS07520 0.21 +0.1 1,667,123 - QEN71_RS07520 0.21 -1.5 1,667,479 - QEN71_RS07520 0.45 -0.8
Or see this region's nucleotide sequence