Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03420

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
3,822,225	-				-0.1
3,822,322	+		MIT1002_03419	0.15	-2.3
3,822,330	-		MIT1002_03419	0.16	+0.9
3,822,330	-		MIT1002_03419	0.16	+0.4
3,822,330	-		MIT1002_03419	0.16	+1.0
3,822,340	+		MIT1002_03419	0.17	-0.3
3,822,348	-		MIT1002_03419	0.18	-1.7
3,822,392	+		MIT1002_03419	0.23	-1.2
3,822,392	+		MIT1002_03419	0.23	-0.7
3,822,392	+		MIT1002_03419	0.23	+1.3
3,822,474	+		MIT1002_03419	0.33	+1.4
3,822,482	-		MIT1002_03419	0.34	+1.0
3,822,492	-		MIT1002_03419	0.35	-1.9
3,822,509	-		MIT1002_03419	0.37	-1.6
3,822,578	-		MIT1002_03419	0.45	-1.2
3,822,590	-		MIT1002_03419	0.47	+3.0
3,822,673	-		MIT1002_03419	0.57	+0.7
3,822,680	-		MIT1002_03419	0.58	+0.2
3,822,720	+		MIT1002_03419	0.62	-0.5
3,822,737	+		MIT1002_03419	0.64	-0.3
3,822,779	+		MIT1002_03419	0.69	+2.0
3,822,781	+		MIT1002_03419	0.70	-1.6
3,822,869	-		MIT1002_03419	0.80	-0.4
3,822,871	+		MIT1002_03419	0.80	+0.8
3,822,879	-		MIT1002_03419	0.81	-2.5
3,822,883	-		MIT1002_03419	0.82	-0.5
3,822,957	+				-0.5
3,822,984	+				+0.2
3,823,074	-				-2.3
3,823,091	-				+0.6
3,823,114	+				-1.2
3,823,141	+				-0.8
3,823,153	+				-1.5
3,823,161	-				-0.8
3,823,548	-		MIT1002_03420	0.43	-0.9
3,823,694	+		MIT1002_03420	0.59	-2.6
3,823,720	+		MIT1002_03420	0.62	-1.3
3,823,756	+		MIT1002_03420	0.66	+0.2
3,823,756	+		MIT1002_03420	0.66	-0.2
3,823,764	-		MIT1002_03420	0.67	-0.1
3,823,837	+		MIT1002_03420	0.75	+0.1
3,823,837	+		MIT1002_03420	0.75	-1.8
3,823,837	+		MIT1002_03420	0.75	+2.4
3,823,837	+		MIT1002_03420	0.75	+0.8
3,823,845	-		MIT1002_03420	0.76	-1.1
3,823,872	+		MIT1002_03420	0.79	+1.1
3,823,872	+		MIT1002_03420	0.79	-0.7
3,823,880	-		MIT1002_03420	0.80	-2.8
3,823,882	-		MIT1002_03420	0.80	-2.5
3,824,056	-				-0.9
3,824,074	+				-0.7
3,824,082	-				-0.9
3,824,138	-				+1.3
3,824,138	-				+0.8
3,824,205	+		MIT1002_03421	0.16	-0.0
3,824,220	-		MIT1002_03421	0.18	-2.4
3,824,222	+		MIT1002_03421	0.18	-2.0
3,824,222	+		MIT1002_03421	0.18	-0.7
3,824,222	+		MIT1002_03421	0.18	-0.4
3,824,222	+		MIT1002_03421	0.18	+0.8
3,824,244	+		MIT1002_03421	0.20	-1.2
3,824,244	+		MIT1002_03421	0.20	-1.9
3,824,252	-		MIT1002_03421	0.21	-0.0
3,824,252	-		MIT1002_03421	0.21	-2.0
3,824,257	-		MIT1002_03421	0.22	-1.7
3,824,257	-		MIT1002_03421	0.22	-0.3
3,824,262	-		MIT1002_03421	0.22	-2.2
3,824,291	+		MIT1002_03421	0.26	+0.2
3,824,299	-		MIT1002_03421	0.27	-1.0
3,824,360	+		MIT1002_03421	0.33	-1.3
3,824,460	-		MIT1002_03421	0.45	-2.1
3,824,460	-		MIT1002_03421	0.45	+0.4
3,824,487	+		MIT1002_03421	0.48	-2.6
3,824,568	+		MIT1002_03421	0.57	-1.3
3,824,568	+		MIT1002_03421	0.57	-1.2
3,824,568	+		MIT1002_03421	0.57	+1.1
3,824,568	+		MIT1002_03421	0.57	-0.7
3,824,575	+		MIT1002_03421	0.57	-1.9
3,824,598	-		MIT1002_03421	0.60	-0.7
3,824,678	-		MIT1002_03421	0.69	-1.7
3,824,860	-		MIT1002_03421	0.89	+0.6
3,824,906	+				-0.4
3,824,906	+				+0.8
3,824,969	+				-0.3
3,825,029	+				+0.0
3,825,042	+				-0.8
3,825,042	+				+0.4
3,825,042	+				+1.6
3,825,050	-				-1.6
3,825,050	-				-1.0