Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03359

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
3,757,894	-		MIT1002_03358	0.71	-1.2
3,758,046	-		MIT1002_03358	0.78	+2.1
3,758,046	-		MIT1002_03358	0.78	-0.1
3,758,048	-		MIT1002_03358	0.78	-0.7
3,758,067	+		MIT1002_03358	0.79	+1.6
3,758,126	-		MIT1002_03358	0.81	-0.6
3,758,127	+		MIT1002_03358	0.82	-0.4
3,758,127	+		MIT1002_03358	0.82	-0.6
3,758,127	+		MIT1002_03358	0.82	-0.2
3,758,140	-		MIT1002_03358	0.82	-1.9
3,758,140	-		MIT1002_03358	0.82	+1.1
3,758,178	-		MIT1002_03358	0.84	+1.7
3,758,211	-		MIT1002_03358	0.85	-0.1
3,758,225	-		MIT1002_03358	0.86	+2.3
3,758,246	+		MIT1002_03358	0.87	-1.6
3,758,295	+		MIT1002_03358	0.89	-0.4
3,758,306	+		MIT1002_03358	0.89	-3.4
3,758,306	+		MIT1002_03358	0.89	+0.4
3,758,306	+		MIT1002_03358	0.89	-2.0
3,758,306	+		MIT1002_03358	0.89	-0.4
3,758,314	-		MIT1002_03358	0.90	-0.9
3,758,314	-		MIT1002_03358	0.90	+0.5
3,758,314	-		MIT1002_03358	0.90	+0.8
3,758,338	+				+1.8
3,758,406	-				-0.8
3,758,408	-				-1.7
3,758,554	-				-1.0
3,758,574	-				-1.6
3,758,578	+				+0.4
3,758,593	+				+0.0
3,758,594	-				-2.2
3,758,655	-				-1.0
3,758,775	+				-0.4
3,758,786	-				-0.0
3,758,788	+				-1.1
3,758,788	-				-0.2
3,758,801	+				+1.0
3,758,831	+				-0.2
3,758,862	+				-0.5
3,758,935	-		MIT1002_03359	0.14	+0.3
3,758,983	-		MIT1002_03359	0.22	+0.6
3,758,997	+		MIT1002_03359	0.25	-0.3
3,759,022	+		MIT1002_03359	0.29	+0.8
3,759,178	+		MIT1002_03359	0.56	-0.6
3,759,231	+		MIT1002_03359	0.65	+0.2
3,759,267	+		MIT1002_03359	0.71	-1.5
3,759,287	+		MIT1002_03359	0.75	-2.4
3,759,320	+		MIT1002_03359	0.80	+2.3
3,759,322	+		MIT1002_03359	0.81	-0.2
3,759,322	+		MIT1002_03359	0.81	-2.9
3,759,322	-		MIT1002_03359	0.81	+0.6
3,759,330	-		MIT1002_03359	0.82	+0.6
3,759,426	-				+1.0
3,759,431	-				-1.1
3,759,798	+				-0.6
3,759,799	+				-0.1
3,759,877	+				-0.1
3,759,977	+		MIT1002_03360	0.10	+0.0
3,760,034	+		MIT1002_03360	0.13	-1.2
3,760,034	+		MIT1002_03360	0.13	-0.5
3,760,034	+		MIT1002_03360	0.13	-0.7
3,760,034	+		MIT1002_03360	0.13	-1.1
3,760,042	-		MIT1002_03360	0.14	+2.0
3,760,042	-		MIT1002_03360	0.14	-1.2
3,760,057	+		MIT1002_03360	0.15	-2.3
3,760,057	+		MIT1002_03360	0.15	+0.6
3,760,057	+		MIT1002_03360	0.15	+1.0
3,760,065	-		MIT1002_03360	0.15	+0.8
3,760,065	-		MIT1002_03360	0.15	-1.0
3,760,065	-		MIT1002_03360	0.15	+0.4
3,760,065	-		MIT1002_03360	0.15	-1.2
3,760,090	+		MIT1002_03360	0.17	+0.8
3,760,098	+		MIT1002_03360	0.17	+0.6
3,760,135	-		MIT1002_03360	0.19	-2.7
3,760,142	-		MIT1002_03360	0.20	+1.6
3,760,201	+		MIT1002_03360	0.23	-0.7
3,760,261	+		MIT1002_03360	0.26	+0.2
3,760,279	-		MIT1002_03360	0.27	+0.6
3,760,284	-		MIT1002_03360	0.28	-0.7
3,760,284	-		MIT1002_03360	0.28	+1.0
3,760,284	-		MIT1002_03360	0.28	-1.2
3,760,297	+		MIT1002_03360	0.28	-0.3
3,760,407	+		MIT1002_03360	0.35	-0.5