Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03189

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
3,552,873	-				+0.8
3,552,873	-				+0.1
3,552,873	-				-2.3
3,552,881	-				-1.9
3,552,883	-				-1.4
3,552,909	+				+1.0
3,552,944	+				+1.3
3,552,969	-				-2.7
3,552,976	+				-1.1
3,553,216	+		MIT1002_03188	0.30	+0.2
3,553,224	-		MIT1002_03188	0.31	-1.3
3,553,253	-		MIT1002_03188	0.35	-2.7
3,553,317	+		MIT1002_03188	0.44	-0.2
3,553,423	+		MIT1002_03188	0.58	-1.2
3,553,465	+		MIT1002_03188	0.64	-1.9
3,553,497	+		MIT1002_03188	0.68	+1.6
3,553,686	+				-0.2
3,553,696	-				+0.7
3,553,809	+		MIT1002_03189	0.13	-2.3
3,553,881	+		MIT1002_03189	0.31	-0.1
3,553,945	-		MIT1002_03189	0.47	-0.2
3,554,003	-		MIT1002_03189	0.61	-1.1
3,554,046	-		MIT1002_03189	0.72	-2.0
3,554,126	-				+0.3
3,554,270	-				+0.6
3,554,324	-				+0.4
3,554,335	+				+0.3
3,554,335	+				-0.9
3,554,343	-				-0.2
3,554,345	+				+0.1
3,554,345	+				-0.2
3,554,353	-				+1.0
3,554,393	+		MIT1002_03190	0.15	+1.1
3,554,448	-		MIT1002_03190	0.22	+0.3
3,554,464	-		MIT1002_03190	0.23	-0.1
3,554,464	-		MIT1002_03190	0.23	-0.5
3,554,497	+		MIT1002_03190	0.28	-0.6
3,554,507	+		MIT1002_03190	0.29	+3.0
3,554,524	-		MIT1002_03190	0.31	+0.1
3,554,529	-		MIT1002_03190	0.31	+0.9
3,554,535	+		MIT1002_03190	0.32	-0.0
3,554,545	+		MIT1002_03190	0.33	-0.6
3,554,545	-		MIT1002_03190	0.33	-0.3
3,554,589	+		MIT1002_03190	0.39	-0.7
3,554,597	-		MIT1002_03190	0.40	+0.1
3,554,597	-		MIT1002_03190	0.40	+2.4
3,554,619	+		MIT1002_03190	0.43	+0.2
3,554,619	+		MIT1002_03190	0.43	+1.3
3,554,627	-		MIT1002_03190	0.44	-0.7
3,554,627	-		MIT1002_03190	0.44	+1.0
3,554,627	-		MIT1002_03190	0.44	-0.3
3,554,710	+		MIT1002_03190	0.54	-1.6
3,554,710	+		MIT1002_03190	0.54	-0.1
3,554,711	+		MIT1002_03190	0.54	+1.7
3,554,728	-		MIT1002_03190	0.56	+0.4
3,554,744	+		MIT1002_03190	0.58	-0.1
3,554,744	+		MIT1002_03190	0.58	+2.0
3,554,823	+		MIT1002_03190	0.68	-1.2
3,554,899	+		MIT1002_03190	0.77	-0.8
3,554,945	-		MIT1002_03190	0.83	-1.8
3,554,994	-		MIT1002_03190	0.89	+0.4
3,555,086	+				-2.0
3,555,088	-				-1.1
3,555,088	-				+1.1
3,555,094	-				+1.0
3,555,094	-				-0.3