Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02446

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
2,726,456	+		MIT1002_02444	0.15	+0.8
2,726,468	+		MIT1002_02444	0.17	-2.1
2,726,496	-		MIT1002_02444	0.20	+0.7
2,726,727	-		MIT1002_02444	0.44	-1.3
2,726,750	-		MIT1002_02444	0.47	-0.0
2,726,828	+		MIT1002_02444	0.55	+0.1
2,726,898	-		MIT1002_02444	0.62	-1.5
2,726,946	+		MIT1002_02444	0.68	+2.6
2,726,992	-		MIT1002_02444	0.73	-0.7
2,727,025	+		MIT1002_02444	0.76	-0.4
2,727,084	+		MIT1002_02444	0.82	-0.5
2,727,097	-		MIT1002_02444	0.84	+0.9
2,727,173	-				+1.6
2,727,201	-				-1.1
2,727,201	-				-0.1
2,727,258	-				-0.1
2,727,324	+				+1.8
2,727,324	-				+0.5
2,727,332	-				-0.7
2,727,375	+		MIT1002_02445	0.22	-0.2
2,727,394	+		MIT1002_02445	0.29	-0.3
2,727,457	+				-1.8
2,727,459	+				-1.4
2,727,466	-				+0.6
2,727,505	-				+0.1
2,727,574	+				-1.0
2,727,581	+				+0.7
2,727,582	-				-0.5
2,727,631	+				-1.1
2,727,640	+				+0.7
2,727,642	+				+2.8
2,727,642	+				+1.7
2,727,650	-				+0.5
2,727,688	+				-1.0
2,727,748	+		MIT1002_02446	0.11	-0.5
2,727,748	+		MIT1002_02446	0.11	-0.9
2,727,748	+		MIT1002_02446	0.11	+0.1
2,727,763	-		MIT1002_02446	0.12	-0.7
2,727,770	+		MIT1002_02446	0.12	-0.8
2,727,785	-		MIT1002_02446	0.12	-1.0
2,727,792	+		MIT1002_02446	0.13	-1.5
2,727,812	-		MIT1002_02446	0.13	+0.9
2,727,846	-		MIT1002_02446	0.15	-1.1
2,727,899	-		MIT1002_02446	0.17	+1.4
2,727,970	-		MIT1002_02446	0.19	+0.8
2,728,018	+		MIT1002_02446	0.21	-0.8
2,728,026	-		MIT1002_02446	0.21	+0.8
2,728,198	+		MIT1002_02446	0.28	-0.8
2,728,198	+		MIT1002_02446	0.28	+0.9
2,728,208	+		MIT1002_02446	0.28	-0.7
2,728,208	+		MIT1002_02446	0.28	+0.5
2,728,208	+		MIT1002_02446	0.28	+0.0
2,728,208	+		MIT1002_02446	0.28	+0.3
2,728,216	-		MIT1002_02446	0.28	-1.6
2,728,221	-		MIT1002_02446	0.28	-0.7
2,728,224	+		MIT1002_02446	0.29	+0.4
2,728,224	+		MIT1002_02446	0.29	+0.6
2,728,224	+		MIT1002_02446	0.29	+0.3
2,728,224	+		MIT1002_02446	0.29	-1.0
2,728,224	+		MIT1002_02446	0.29	+2.7
2,728,224	+		MIT1002_02446	0.29	-1.0
2,728,232	-		MIT1002_02446	0.29	+0.0
2,728,234	+		MIT1002_02446	0.29	+1.1
2,728,234	+		MIT1002_02446	0.29	+1.3
2,728,242	-		MIT1002_02446	0.29	+0.1
2,728,242	-		MIT1002_02446	0.29	+1.6
2,728,243	-		MIT1002_02446	0.29	+0.3
2,728,291	-		MIT1002_02446	0.31	+0.1
2,728,356	-		MIT1002_02446	0.33	-0.7
2,728,356	-		MIT1002_02446	0.33	-0.2
2,728,475	-		MIT1002_02446	0.38	+0.7
2,728,477	+		MIT1002_02446	0.38	-0.0
2,728,477	+		MIT1002_02446	0.38	+1.5
2,728,491	+		MIT1002_02446	0.38	-2.7
2,728,557	-		MIT1002_02446	0.41	-0.8
2,728,557	-		MIT1002_02446	0.41	+0.9
2,728,619	+		MIT1002_02446	0.43	-0.9
2,728,619	+		MIT1002_02446	0.43	+1.1
2,728,627	-		MIT1002_02446	0.44	-0.2
2,728,658	-		MIT1002_02446	0.45	-1.1
2,728,666	-		MIT1002_02446	0.45	+1.3
2,728,666	-		MIT1002_02446	0.45	-1.3
2,728,718	-		MIT1002_02446	0.47	-0.2
2,728,767	-		MIT1002_02446	0.49	-3.4
2,728,787	-		MIT1002_02446	0.49	+0.7
2,728,826	-		MIT1002_02446	0.51	-1.1
2,728,855	+		MIT1002_02446	0.52	-1.7
2,728,863	-		MIT1002_02446	0.52	+0.1
2,728,901	+		MIT1002_02446	0.54	-1.6
2,728,932	+		MIT1002_02446	0.55	+0.6
2,728,932	+		MIT1002_02446	0.55	+0.0
2,728,950	+		MIT1002_02446	0.55	+0.6
2,728,958	-		MIT1002_02446	0.56	+1.5
2,729,058	+		MIT1002_02446	0.59	+2.0
2,729,071	-		MIT1002_02446	0.60	-0.2
2,729,080	-		MIT1002_02446	0.60	-1.9
2,729,157	+		MIT1002_02446	0.63	-1.4
2,729,165	-		MIT1002_02446	0.63	+0.3
2,729,179	+		MIT1002_02446	0.64	-1.8
2,729,235	-		MIT1002_02446	0.66	+0.3
2,729,260	-		MIT1002_02446	0.67	+0.4
2,729,272	+		MIT1002_02446	0.67	+0.9
2,729,280	-		MIT1002_02446	0.68	-1.2
2,729,328	+		MIT1002_02446	0.69	-0.1
2,729,411	+		MIT1002_02446	0.73	+2.6
2,729,411	+		MIT1002_02446	0.73	-0.5
2,729,457	-		MIT1002_02446	0.74	-1.1
2,729,522	+		MIT1002_02446	0.77	+0.5
2,729,561	+		MIT1002_02446	0.78	-0.8
2,729,561	-		MIT1002_02446	0.78	+0.3
2,729,570	+		MIT1002_02446	0.78	+0.9
2,729,570	+		MIT1002_02446	0.78	-1.1
2,729,619	+		MIT1002_02446	0.80	+1.1
2,729,622	-		MIT1002_02446	0.80	-1.2
2,729,624	+		MIT1002_02446	0.80	-1.6
2,729,629	+		MIT1002_02446	0.81	-0.6
2,729,649	-		MIT1002_02446	0.81	-0.1
2,729,704	+		MIT1002_02446	0.83	-2.1
2,729,725	+		MIT1002_02446	0.84	+0.0
2,729,744	-		MIT1002_02446	0.85	-0.2
2,729,803	+		MIT1002_02446	0.87	+0.8
2,729,826	-		MIT1002_02446	0.88	-1.4
2,729,944	-				+0.8
2,730,031	+				-1.7
2,730,092	+				+1.4
2,730,223	+				+0.1
2,730,272	-				+1.5
2,730,437	+				+0.1
2,730,469	+				+0.5
2,730,935	+				-2.5
2,731,038	+		MIT1002_02447	0.17	+0.3
2,731,046	-		MIT1002_02447	0.18	-0.1