Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02352

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
2,621,446	-				-0.5
2,621,456	+				-1.4
2,621,497	+				+0.6
2,621,524	-				+2.5
2,621,524	-				-0.3
2,621,534	+				+1.6
2,621,547	+				+1.5
2,621,555	-				+1.0
2,621,555	-				+1.5
2,621,555	-				-1.8
2,621,583	+				-0.2
2,621,612	-				-1.1
2,621,612	-				-1.4
2,621,636	-				-0.2
2,621,669	-				+0.4
2,621,669	-				-1.1
2,621,748	+				+0.9
2,621,804	-		MIT1002_02351	0.17	-0.4
2,621,828	-		MIT1002_02351	0.23	-2.5
2,621,910	+		MIT1002_02351	0.41	+1.3
2,621,915	-		MIT1002_02351	0.42	-1.2
2,621,935	-		MIT1002_02351	0.46	-2.9
2,621,952	+		MIT1002_02351	0.50	+1.0
2,622,033	+		MIT1002_02351	0.68	-1.6
2,622,058	+		MIT1002_02351	0.74	+1.5
2,622,076	+		MIT1002_02351	0.78	-0.6
2,622,092	-		MIT1002_02351	0.81	+1.1
2,622,144	-				+0.2
2,622,150	+				-0.5
2,622,216	+				+0.5
2,622,216	+				+1.9
2,622,235	+				+0.2
2,622,243	-				-2.2
2,622,286	+				+0.4
2,622,294	-				-2.4
2,622,294	-				-0.4
2,622,467	-				+0.2
2,622,475	+				+0.7
2,622,477	+				+0.9
2,622,482	+				+0.3
2,622,484	+				-0.1
2,622,523	+		MIT1002_02352	0.11	-0.2
2,622,523	+		MIT1002_02352	0.11	-0.6
2,622,530	+		MIT1002_02352	0.12	-1.7
2,622,533	+		MIT1002_02352	0.12	+0.8
2,622,587	+		MIT1002_02352	0.19	+0.1
2,622,595	-		MIT1002_02352	0.19	-0.4
2,622,595	-		MIT1002_02352	0.19	-2.0
2,622,653	-		MIT1002_02352	0.26	-0.5
2,622,696	-		MIT1002_02352	0.31	-2.4
2,622,867	-		MIT1002_02352	0.50	-0.6
2,622,872	-		MIT1002_02352	0.51	-1.1
2,622,963	-		MIT1002_02352	0.61	-1.3
2,623,059	+		MIT1002_02352	0.72	-1.7
2,623,067	-		MIT1002_02352	0.73	-0.3
2,623,109	+		MIT1002_02352	0.78	+0.1
2,623,144	+		MIT1002_02352	0.81	+0.6
2,623,231	-				-0.4
2,623,253	-				-0.8
2,623,258	-				+2.4