Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02307

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
2,573,395	-		MIT1002_02306	0.20	-2.3
2,573,410	-		MIT1002_02306	0.21	-1.5
2,573,422	-		MIT1002_02306	0.22	-0.3
2,573,538	+		MIT1002_02306	0.32	-2.4
2,573,668	-		MIT1002_02306	0.43	-2.2
2,573,718	-		MIT1002_02306	0.47	+0.5
2,573,750	+		MIT1002_02306	0.49	+0.9
2,573,808	+		MIT1002_02306	0.54	-0.5
2,573,876	-		MIT1002_02306	0.60	-1.5
2,573,900	+		MIT1002_02306	0.62	-2.3
2,573,900	+		MIT1002_02306	0.62	+0.0
2,573,908	-		MIT1002_02306	0.62	-1.0
2,574,071	-		MIT1002_02306	0.76	-3.2
2,574,129	+		MIT1002_02306	0.80	-3.3
2,574,251	+				-2.6
2,574,259	-				+0.7
2,574,259	-				+0.9
2,574,259	-				-3.2
2,574,315	-				-2.8
2,574,317	-				-0.4
2,574,319	+				+1.5
2,574,319	+				-3.3
2,574,350	+				+0.3
2,574,350	+				+1.5
2,574,371	-				+1.3
2,574,406	-				-0.4
2,574,474	+		MIT1002_02307	0.17	-1.6
2,574,474	-		MIT1002_02307	0.17	-2.0
2,574,537	+		MIT1002_02307	0.28	+0.5
2,574,590	-		MIT1002_02307	0.36	+0.5
2,574,602	+		MIT1002_02307	0.39	-1.1
2,574,604	+		MIT1002_02307	0.39	+2.1
2,574,612	-		MIT1002_02307	0.40	-2.4
2,574,625	+		MIT1002_02307	0.42	-0.6
2,574,633	-		MIT1002_02307	0.44	+1.3
2,574,676	+		MIT1002_02307	0.51	+0.3
2,574,787	+		MIT1002_02307	0.69	+0.7
2,574,845	-		MIT1002_02307	0.79	-1.8
2,574,878	-		MIT1002_02307	0.84	+1.7
2,575,003	-				-1.8
2,575,026	+				+0.7
2,575,026	+				-0.2
2,575,028	+				+1.8
2,575,034	-				-1.0
2,575,086	+				-0.3
2,575,087	+				-1.3
2,575,095	-				+0.2
2,575,160	-				-0.7
2,575,162	+				+0.8
2,575,162	+				+3.2
2,575,170	-				+2.5
2,575,204	+		MIT1002_02308	0.12	-1.0
2,575,204	+		MIT1002_02308	0.12	+0.1
2,575,204	+		MIT1002_02308	0.12	-0.6
2,575,204	+		MIT1002_02308	0.12	+0.2
2,575,204	+		MIT1002_02308	0.12	-1.0
2,575,212	-		MIT1002_02308	0.12	-0.9
2,575,212	-		MIT1002_02308	0.12	-1.0
2,575,212	-		MIT1002_02308	0.12	-0.2
2,575,212	-		MIT1002_02308	0.12	+1.5
2,575,212	-		MIT1002_02308	0.12	-1.6
2,575,241	-		MIT1002_02308	0.14	-1.2
2,575,246	+		MIT1002_02308	0.15	+0.7
2,575,271	+		MIT1002_02308	0.17	-0.5
2,575,289	-		MIT1002_02308	0.18	+0.5
2,575,430	-		MIT1002_02308	0.28	+0.9
2,575,464	-		MIT1002_02308	0.31	-1.5
2,575,475	+		MIT1002_02308	0.32	-1.4
2,575,481	+		MIT1002_02308	0.32	-0.4
2,575,481	+		MIT1002_02308	0.32	-0.8
2,575,481	+		MIT1002_02308	0.32	-0.5
2,575,482	-		MIT1002_02308	0.32	-1.5
2,575,489	-		MIT1002_02308	0.33	+1.8
2,575,516	+		MIT1002_02308	0.35	-1.9
2,575,532	-		MIT1002_02308	0.36	+1.3
2,575,532	-		MIT1002_02308	0.36	-1.2
2,575,632	-		MIT1002_02308	0.44	+0.2
2,575,711	+		MIT1002_02308	0.49	-2.9
2,575,755	-		MIT1002_02308	0.53	-0.9
2,575,819	+		MIT1002_02308	0.57	+0.7
2,575,827	-		MIT1002_02308	0.58	-1.5
2,575,872	+		MIT1002_02308	0.61	-0.4
2,575,921	+		MIT1002_02308	0.65	-0.3
2,575,921	+		MIT1002_02308	0.65	+2.3
2,575,929	-		MIT1002_02308	0.66	+0.0
2,575,929	-		MIT1002_02308	0.66	-0.0
2,575,946	+		MIT1002_02308	0.67	+0.6
2,575,954	-		MIT1002_02308	0.67	-0.6