Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02291

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
2,553,788	-				-0.4
2,553,795	+				+0.5
2,553,802	-				+0.1
2,553,803	-				+0.5
2,553,803	-				+0.9
2,553,813	+				-0.8
2,553,818	+				+1.0
2,553,826	-				-0.6
2,553,829	+				+0.0
2,553,833	+				+0.8
2,553,859	-				-1.0
2,553,877	+				+0.1
2,553,884	-				-1.0
2,553,885	-				-1.9
2,553,917	-				+0.3
2,553,935	+		MIT1002_02290	0.12	+1.2
2,553,943	-		MIT1002_02290	0.13	+0.4
2,553,958	+		MIT1002_02290	0.15	+0.3
2,553,974	+		MIT1002_02290	0.17	-1.0
2,553,974	+		MIT1002_02290	0.17	+1.7
2,553,974	+		MIT1002_02290	0.17	+1.5
2,553,982	-		MIT1002_02290	0.18	+0.5
2,553,982	-		MIT1002_02290	0.18	-3.0
2,553,983	+		MIT1002_02290	0.18	-2.2
2,553,993	+		MIT1002_02290	0.19	-0.4
2,554,087	+		MIT1002_02290	0.32	-0.3
2,554,095	-		MIT1002_02290	0.33	+0.3
2,554,095	-		MIT1002_02290	0.33	-0.5
2,554,095	-		MIT1002_02290	0.33	-1.7
2,554,124	+		MIT1002_02290	0.36	+0.5
2,554,129	+		MIT1002_02290	0.37	+0.9
2,554,129	+		MIT1002_02290	0.37	-3.1
2,554,130	+		MIT1002_02290	0.37	-1.3
2,554,130	+		MIT1002_02290	0.37	+0.7
2,554,131	-		MIT1002_02290	0.37	+2.2
2,554,131	-		MIT1002_02290	0.37	-3.1
2,554,132	-		MIT1002_02290	0.37	-1.3
2,554,137	-		MIT1002_02290	0.38	+1.2
2,554,137	-		MIT1002_02290	0.38	+0.2
2,554,138	-		MIT1002_02290	0.38	-0.3
2,554,150	+		MIT1002_02290	0.40	-2.6
2,554,201	-		MIT1002_02290	0.46	-1.7
2,554,209	-		MIT1002_02290	0.47	+1.5
2,554,221	+		MIT1002_02290	0.49	+1.1
2,554,221	+		MIT1002_02290	0.49	+1.2
2,554,221	+		MIT1002_02290	0.49	+0.5
2,554,221	+		MIT1002_02290	0.49	-0.5
2,554,221	+		MIT1002_02290	0.49	-0.3
2,554,221	+		MIT1002_02290	0.49	+0.1
2,554,221	+		MIT1002_02290	0.49	+0.5
2,554,221	+		MIT1002_02290	0.49	-2.3
2,554,221	+		MIT1002_02290	0.49	-0.1
2,554,221	+		MIT1002_02290	0.49	-0.8
2,554,221	+		MIT1002_02290	0.49	+0.9
2,554,221	+		MIT1002_02290	0.49	+0.0
2,554,229	-		MIT1002_02290	0.50	-1.2
2,554,229	-		MIT1002_02290	0.50	+0.3
2,554,229	-		MIT1002_02290	0.50	-0.6
2,554,229	-		MIT1002_02290	0.50	+0.2
2,554,229	-		MIT1002_02290	0.50	+0.0
2,554,229	-		MIT1002_02290	0.50	+0.3
2,554,229	-		MIT1002_02290	0.50	+0.3
2,554,229	-		MIT1002_02290	0.50	-1.3
2,554,229	-		MIT1002_02290	0.50	-0.2
2,554,229	-		MIT1002_02290	0.50	-0.5
2,554,229	-		MIT1002_02290	0.50	+0.7
2,554,229	-		MIT1002_02290	0.50	-2.5
2,554,235	+		MIT1002_02290	0.51	-1.0
2,554,243	-		MIT1002_02290	0.52	-0.1
2,554,325	+		MIT1002_02290	0.62	-0.2
2,554,435	-		MIT1002_02290	0.76	+0.8
2,554,436	+		MIT1002_02290	0.76	-1.5
2,554,449	+		MIT1002_02290	0.78	-2.6
2,554,450	+		MIT1002_02290	0.78	+1.2
2,554,518	+		MIT1002_02290	0.87	+0.1
2,554,518	+		MIT1002_02290	0.87	-0.3
2,554,518	+		MIT1002_02290	0.87	-1.4
2,554,526	-		MIT1002_02290	0.88	+1.5
2,554,541	+		MIT1002_02290	0.90	+2.5
2,554,549	-				+0.6
2,554,549	-				+0.1
2,554,561	-				-0.4
2,554,584	-				-1.0
2,554,694	+				+0.8
2,554,694	+				+0.4
2,554,694	+				+3.6
2,554,694	+				-0.5
2,554,696	+				-2.2
2,554,702	-				+2.2
2,554,702	-				-0.5
2,554,706	+				+0.1
2,554,712	+				-0.1
2,554,896	+		MIT1002_02291	0.69	+0.1
2,554,924	+		MIT1002_02291	0.82	-3.0
2,554,950	+				-2.2
2,555,589	+				+0.2
2,555,725	+				+0.2
2,555,733	+				+1.9
2,555,836	-		MIT1002_02293	0.11	-0.5
2,555,874	-		MIT1002_02293	0.13	-0.9