Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02206
Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7 |
---|---|---|---|---|---|
remove | |||||
2,465,697 | - | -0.5 | |||
2,465,751 | + | -0.7 | |||
2,465,758 | + | +1.2 | |||
2,465,759 | - | +1.2 | |||
2,465,759 | - | -0.4 | |||
2,465,759 | - | -0.6 | |||
2,465,809 | + | -0.4 | |||
2,465,819 | - | -0.5 | |||
2,465,877 | + | +1.1 | |||
2,465,877 | + | +2.2 | |||
2,465,885 | - | +2.2 | |||
2,465,978 | - | -3.3 | |||
2,465,984 | - | -0.5 | |||
2,465,985 | - | -6.6 | |||
2,466,735 | - | -0.6 | |||
2,466,872 | - | MIT1002_02206 | 0.17 | -1.0 | |
2,466,952 | - | MIT1002_02206 | 0.24 | -2.5 | |
2,467,127 | - | MIT1002_02206 | 0.40 | -0.5 | |
2,467,279 | - | MIT1002_02206 | 0.54 | -1.3 | |
2,467,351 | - | MIT1002_02206 | 0.60 | -0.4 | |
2,468,776 | + | -2.0 |
Or see this region's nucleotide sequence