Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02057

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
2,317,945	+				-0.2
2,317,950	-				+0.2
2,317,957	+				+0.6
2,317,965	-				-1.7
2,317,965	-				+4.2
2,317,969	+				-1.7
2,317,988	+				+0.3
2,317,988	+				-1.2
2,318,000	+				+1.5
2,318,000	+				+0.0
2,318,000	+				+0.1
2,318,000	+				-0.3
2,318,000	+				+3.8
2,318,000	+				-0.8
2,318,000	+				-0.4
2,318,000	+				+0.3
2,318,008	-				-1.0
2,318,008	-				+0.3
2,318,008	-				+0.4
2,318,008	-				-0.2
2,318,119	-				-0.9
2,318,155	+				+1.5
2,318,155	+				+1.3
2,318,378	-				-0.8
2,318,418	+				+1.1
2,318,487	-				-0.7
2,318,512	-				+2.2
2,318,592	-				-1.0
2,318,779	+				-2.3
2,318,922	+				-1.7
2,318,922	+				+1.2
2,318,936	-				+0.5
2,318,936	-				+0.5
2,318,941	+				-0.6
2,318,949	-				+1.0
2,318,949	-				-1.4
2,318,995	-				-0.7
2,319,036	+				-0.6
2,319,080	+				-0.9
2,319,183	-		MIT1002_02057	0.15	-0.7
2,319,353	+		MIT1002_02057	0.26	+1.7
2,319,361	-		MIT1002_02057	0.26	-0.3
2,319,426	-		MIT1002_02057	0.30	+0.4
2,319,431	+		MIT1002_02057	0.31	+0.3
2,319,462	-		MIT1002_02057	0.32	-0.2
2,319,502	+		MIT1002_02057	0.35	-0.3
2,319,502	+		MIT1002_02057	0.35	+0.4
2,319,502	+		MIT1002_02057	0.35	-1.0
2,319,510	-		MIT1002_02057	0.35	-2.5
2,319,524	+		MIT1002_02057	0.36	-0.9
2,319,525	-		MIT1002_02057	0.36	+1.2
2,319,609	-		MIT1002_02057	0.41	+0.9
2,319,637	+		MIT1002_02057	0.43	+2.8
2,319,704	+		MIT1002_02057	0.47	+0.9
2,319,739	-		MIT1002_02057	0.49	+0.1
2,319,761	-		MIT1002_02057	0.51	+0.9
2,319,762	-		MIT1002_02057	0.51	-0.3
2,319,825	-		MIT1002_02057	0.55	+0.8
2,319,830	-		MIT1002_02057	0.55	+0.4
2,319,853	+		MIT1002_02057	0.56	-0.4
2,319,940	-		MIT1002_02057	0.62	-1.0
2,319,990	+		MIT1002_02057	0.65	+0.0
2,319,998	-		MIT1002_02057	0.65	+0.8
2,320,155	+		MIT1002_02057	0.75	-0.4
2,320,160	+		MIT1002_02057	0.75	-1.3
2,320,168	-		MIT1002_02057	0.76	+0.3
2,320,173	-		MIT1002_02057	0.76	-1.3
2,320,221	-		MIT1002_02057	0.79	-1.0
2,320,289	-		MIT1002_02057	0.83	+0.6
2,320,300	+		MIT1002_02057	0.84	+0.8
2,320,303	-		MIT1002_02057	0.84	+1.4
2,320,358	+		MIT1002_02057	0.87	+0.5
2,320,371	+		MIT1002_02057	0.88	-0.1
2,320,371	+		MIT1002_02057	0.88	+0.1
2,320,372	+		MIT1002_02057	0.88	+2.1
2,320,394	-		MIT1002_02057	0.89	+0.8
2,320,394	-		MIT1002_02057	0.89	-0.5
2,320,401	-		MIT1002_02057	0.90	-0.3
2,320,518	-				+0.4
2,320,603	-				+0.5
2,320,633	+				+0.2
2,320,681	-				+1.5
2,320,691	+				+1.8
2,320,699	+				+0.0
2,320,712	-				+0.0
2,320,750	+				+0.5
2,320,763	-				+1.0
2,320,763	-				-1.3
2,320,763	-				+0.6
2,320,795	+				+0.7
2,320,817	-				-1.3
2,320,824	+				+1.4
2,320,824	+				+0.8
2,320,832	-				+2.3
2,320,888	+		MIT1002_02058	0.31	+0.4
2,320,918	-		MIT1002_02058	0.46	-0.2
2,320,942	+		MIT1002_02058	0.58	-0.7
2,321,056	-				-0.6
2,321,157	-		MIT1002_02059	0.43	-1.2
2,321,166	+		MIT1002_02059	0.46	-0.3
2,321,168	+		MIT1002_02059	0.47	-0.7
2,321,176	-		MIT1002_02059	0.50	+0.6
2,321,176	-		MIT1002_02059	0.50	+1.1
2,321,326	+				-0.9
2,321,334	-				+1.3
2,321,418	+		MIT1002_02060	0.20	-0.6
2,321,474	-		MIT1002_02060	0.36	-0.8
2,321,482	-		MIT1002_02060	0.39	-0.6