Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01730

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
1,921,838	+		MIT1002_01727	0.88	+0.2
1,921,894	+				-0.9
1,921,899	+				+3.2
1,921,899	+				+0.3
1,921,902	-				-0.4
1,921,922	-				-0.5
1,921,967	-				-0.7
1,921,991	-				-0.8
1,922,843	+				-0.7
1,922,880	-				-0.2
1,922,887	+				-0.7
1,922,895	-				-2.7
1,922,956	+		MIT1002_01730	0.14	-1.6
1,923,017	+		MIT1002_01730	0.20	+0.4
1,923,018	-		MIT1002_01730	0.20	+1.0
1,923,121	+		MIT1002_01730	0.30	+0.2
1,923,129	-		MIT1002_01730	0.31	-1.0
1,923,161	+		MIT1002_01730	0.34	+1.5
1,923,192	+		MIT1002_01730	0.37	-0.7
1,923,192	+		MIT1002_01730	0.37	-2.3
1,923,202	-		MIT1002_01730	0.38	-1.1
1,923,205	-		MIT1002_01730	0.39	+2.3
1,923,238	+		MIT1002_01730	0.42	+0.7
1,923,248	-		MIT1002_01730	0.43	-1.6
1,923,331	+		MIT1002_01730	0.51	-1.1
1,923,339	-		MIT1002_01730	0.52	-1.2
1,923,413	+		MIT1002_01730	0.59	-1.4
1,923,420	-		MIT1002_01730	0.60	+1.2
1,923,619	+		MIT1002_01730	0.80	-1.7
1,923,627	-		MIT1002_01730	0.81	-0.3