Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01261

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
1,386,809	+		MIT1002_01260	0.37	-1.3
1,386,887	-		MIT1002_01260	0.43	+1.7
1,386,925	-		MIT1002_01260	0.46	-1.4
1,387,078	+		MIT1002_01260	0.57	-4.5
1,387,122	-		MIT1002_01260	0.60	+2.0
1,387,206	+		MIT1002_01260	0.66	+0.4
1,387,384	-		MIT1002_01260	0.79	+0.8
1,387,410	+		MIT1002_01260	0.81	+0.3
1,387,410	+		MIT1002_01260	0.81	-1.1
1,387,410	+		MIT1002_01260	0.81	-1.8
1,387,410	+		MIT1002_01260	0.81	+1.4
1,387,420	-		MIT1002_01260	0.81	+0.6
1,387,435	+		MIT1002_01260	0.82	-1.9
1,387,440	+		MIT1002_01260	0.83	+0.2
1,387,440	+		MIT1002_01260	0.83	-0.9
1,387,529	+		MIT1002_01260	0.89	+1.8
1,387,669	-				+1.6
1,387,691	+				-1.5
1,387,691	+				+1.2
1,387,691	+				-0.8
1,387,691	+				-0.5
1,387,691	+				-2.4
1,387,691	+				-0.0
1,387,691	+				+0.3
1,387,691	+				-0.8
1,387,699	-				-1.3
1,387,699	-				-0.7
1,387,699	-				-0.3
1,387,699	-				+0.4
1,387,699	-				+0.0
1,387,699	-				+1.3
1,387,699	-				+1.0
1,387,699	-				+0.8
1,387,739	+				-2.8
1,387,792	-				-2.2
1,387,874	+				+0.8
1,387,874	+				+0.3
1,387,874	+				-0.6
1,387,889	+				+0.6
1,387,897	-				-1.7
1,387,897	-				-1.4
1,387,902	+				+1.3
1,387,909	+				-2.1
1,387,920	+				+1.6
1,387,920	+				+0.1
1,387,928	-				-0.1
1,387,936	+				-0.4
1,387,997	-		MIT1002_01261	0.11	+2.4
1,388,027	+		MIT1002_01261	0.13	+1.0
1,388,027	+		MIT1002_01261	0.13	+0.5
1,388,101	-		MIT1002_01261	0.16	+0.8
1,388,177	-		MIT1002_01261	0.20	-1.7
1,388,213	+		MIT1002_01261	0.22	+0.5
1,388,232	-		MIT1002_01261	0.23	-0.3
1,388,269	+		MIT1002_01261	0.25	-0.4
1,388,270	+		MIT1002_01261	0.25	-1.8
1,388,270	-		MIT1002_01261	0.25	+0.3
1,388,270	-		MIT1002_01261	0.25	-0.5
1,388,278	-		MIT1002_01261	0.25	+1.6
1,388,278	-		MIT1002_01261	0.25	-1.5
1,388,278	-		MIT1002_01261	0.25	+3.6
1,388,313	+		MIT1002_01261	0.27	-1.2
1,388,321	-		MIT1002_01261	0.27	-0.7
1,388,334	-		MIT1002_01261	0.28	-2.9
1,388,401	-		MIT1002_01261	0.31	+0.6
1,388,401	-		MIT1002_01261	0.31	+0.8
1,388,413	-		MIT1002_01261	0.32	-0.5
1,388,475	+		MIT1002_01261	0.35	-1.8
1,388,481	-		MIT1002_01261	0.35	+0.8
1,388,481	-		MIT1002_01261	0.35	+0.1
1,388,517	+		MIT1002_01261	0.37	-2.1
1,388,519	+		MIT1002_01261	0.37	+1.6
1,388,519	+		MIT1002_01261	0.37	+1.0
1,388,519	+		MIT1002_01261	0.37	-1.5
1,388,519	+		MIT1002_01261	0.37	+1.0
1,388,527	-		MIT1002_01261	0.37	-0.3
1,388,527	-		MIT1002_01261	0.37	+0.5
1,388,527	-		MIT1002_01261	0.37	-0.8
1,388,527	-		MIT1002_01261	0.37	-1.6
1,388,549	+		MIT1002_01261	0.38	-2.8
1,388,559	-		MIT1002_01261	0.39	+0.3
1,388,627	+		MIT1002_01261	0.42	-0.8
1,388,633	-		MIT1002_01261	0.43	+0.6
1,388,737	+		MIT1002_01261	0.48	-1.9
1,388,756	+		MIT1002_01261	0.49	+1.8
1,388,789	+		MIT1002_01261	0.50	+1.6
1,388,797	-		MIT1002_01261	0.51	+0.5
1,388,816	+		MIT1002_01261	0.52	-0.8
1,388,892	-		MIT1002_01261	0.55	+1.4
1,388,915	+		MIT1002_01261	0.57	+0.8
1,389,022	+		MIT1002_01261	0.62	+1.4
1,389,022	-		MIT1002_01261	0.62	+0.1
1,389,060	+		MIT1002_01261	0.64	-1.2
1,389,098	+		MIT1002_01261	0.66	+0.2
1,389,138	-		MIT1002_01261	0.68	+2.4
1,389,138	-		MIT1002_01261	0.68	+1.9
1,389,182	+		MIT1002_01261	0.70	-0.7
1,389,226	-		MIT1002_01261	0.72	+1.6
1,389,278	+		MIT1002_01261	0.75	+1.4
1,389,278	+		MIT1002_01261	0.75	+0.3
1,389,278	+		MIT1002_01261	0.75	+0.6
1,389,286	-		MIT1002_01261	0.75	+0.2
1,389,286	-		MIT1002_01261	0.75	-1.9
1,389,286	-		MIT1002_01261	0.75	-1.8
1,389,286	-		MIT1002_01261	0.75	-1.4
1,389,286	-		MIT1002_01261	0.75	+1.4
1,389,306	-		MIT1002_01261	0.76	-1.4
1,389,306	-		MIT1002_01261	0.76	+0.8
1,389,306	-		MIT1002_01261	0.76	-2.3
1,389,306	-		MIT1002_01261	0.76	-0.5
1,389,476	-		MIT1002_01261	0.84	-0.0
1,389,521	+		MIT1002_01261	0.87	-2.8
1,389,559	+		MIT1002_01261	0.89	+0.6
1,389,614	+				-0.2
1,389,721	-				+1.7
1,389,775	-				-0.2
1,389,826	-				+1.0
1,389,828	-				-1.0
1,389,828	-				-0.8
1,390,018	-				+1.3
1,390,052	-				-0.2
1,390,073	+				+1.0
1,390,115	-				+0.6
1,390,115	-				+0.0
1,390,117	+				-0.9
1,390,125	-				+1.5
1,390,125	-				+0.6
1,390,125	-				-1.1
1,390,131	+				+0.1
1,390,244	+		MIT1002_01262	0.20	+0.1
1,390,347	+		MIT1002_01262	0.31	+0.5
1,390,355	-		MIT1002_01262	0.31	+1.0
1,390,362	-		MIT1002_01262	0.32	+0.3
1,390,364	+		MIT1002_01262	0.32	+0.5
1,390,512	+		MIT1002_01262	0.48	+0.0
1,390,515	-		MIT1002_01262	0.49	+1.3
1,390,520	-		MIT1002_01262	0.49	+0.7
1,390,525	+		MIT1002_01262	0.50	+1.9
1,390,550	-		MIT1002_01262	0.53	+0.2